| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g28388 | 7:4,475,738-4,478,486 | + | C2H7g04806 | CX7g048777 | LOC_Os07g09870 | Os07g0196900 | - | Detail |
| C1H7g03755 | 7:4,483,040-4,486,420 | + | C2H7g12253 | CX7g050075 | LOC_Os07g09890 | Os07g0197100 | OsHXK4 | Detail |
| C1H7g06661 | 7:4,489,924-4,490,765 | - | - | CX7g049597 | LOC_Os07g09900 | Os07g0197300 | - | Detail |
| C1H7g16955 | 7:4,498,277-4,499,194 | - | C2H7g15184 | CX7g049597 | LOC_Os07g09910 | Os07g0197300 | - | Detail |
| C1H7g14157 | 7:4,515,915-4,516,823 | - | C2H7g15184 | CX7g049597 | LOC_Os07g09910 | Os07g0197300 | - | Detail |
| C1H7g14757 | 7:4,535,881-4,537,539 | - | C2H7g15184 | CX7g049597 | LOC_Os07g09940 | Os07g0197500 | - | Detail |
| C1H7g07557 | 7:4,558,334-4,562,047 | + | C2H7g05933 | CX7g049031 | LOC_Os07g09970 | Os07g0198300 | - | Detail |
| C1H7g19019 | 7:4,572,841-4,573,784 | + | C2H7g27767 | CX7g049048 | LOC_Os07g09690 | Os07g0195200 | - | Detail |
| C1H7g25381 | 7:4,574,022-4,581,267 | + | C2H7g01059 | CX7g049401 | LOC_Os07g10110 | Os07g0200000 | - | Detail |
| C1H7g28222 | 7:4,585,067-4,587,079 | + | C2H7g19604 | CX7g046824 | LOC_Os07g10030 | Os07g0200500 | - | Detail |
| C1H7g14136 | 7:4,596,514-4,601,836 | + | C2H7g26821 | CX7g049465 | LOC_Os07g10130 | Os07g0200700 | - | Detail |
| C1H7g20884 | 7:4,602,529-4,603,042 | - | C2H7g14852 | CX7g049999 | - | Os07g0200801 | - | Detail |
| C1H7g18018 | 7:4,606,715-4,613,879 | + | C2H7g15337 | CX7g046805 | LOC_Os07g10150 | Os07g0201100 | - | Detail |
| C1H7g16889 | 7:4,622,731-4,624,779 | + | C2H7g23431 | CX7g049050 | LOC_Os07g10160 | Os07g0201300 | - | Detail |
| C1H7g07072 | 7:4,638,020-4,639,987 | + | C2H7g22813 | CX7g048405 | LOC_Os07g10190 | Os07g0201500 | - | Detail |
| C1H7g24210 | 7:4,651,846-4,653,429 | + | C2H7g19489 | CX7g047593 | LOC_Os07g10190 | Os07g0201500 | - | Detail |
| C1H7g14532 | 7:4,658,586-4,661,221 | - | - | - | - | - | - | Detail |
| C1H7g31892 | 7:4,665,271-4,668,470 | + | C2H7g01326 | CX7g049299 | LOC_Os07g10230 | Os07g0201800 | - | Detail |
| C1H7g18653 | 7:4,685,848-4,691,024 | - | C2H7g00507 | CX7g047103 | LOC_Os07g10250 | Os07g0202100 | - | Detail |
| C1H7g11207 | 7:4,696,830-4,699,168 | - | C2H7g20580 | CX7g049789 | LOC_Os07g10256 | Os07g0202300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001275 | 1:31,558,445-31,559,020 | - | C1H1g19774 | C2H1g08171 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| CX1g002960 | 1:31,570,249-31,570,923 | + | C1H1g14773 | C2H1g07733 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| CX1g003525 | 1:31,574,958-31,577,885 | + | C1H1g29926 | C2H1g10096 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| CX1g003586 | 1:31,578,531-31,580,750 | - | C1H1g29563 | C2H1g19797 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| CX1g004163 | 1:31,583,546-31,585,240 | - | C1H1g16875 | C2H1g10064 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| CX1g006982 | 1:31,587,574-31,590,372 | - | C1H1g09267 | C2H1g01874 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| CX1g004599 | 1:31,592,088-31,593,891 | + | C1H1g18254 | C2H1g04373 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| CX1g001311 | 1:31,596,164-31,599,484 | - | C1H1g00383 | C2H1g19266 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| CX1g004790 | 1:31,603,549-31,609,170 | + | C1H1g00574 | C2H1g14897 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| CX1g000601 | 1:31,624,769-31,629,009 | + | C1H1g31694 | C2H1g11131 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| CX1g006439 | 1:31,645,680-31,650,498 | + | C1H1g07002 | C2H1g22191 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| CX1g006609 | 1:31,651,243-31,653,240 | + | C1H1g10107 | C2H1g03571 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| CX1g003404 | 1:31,653,858-31,656,164 | - | C1H1g13635 | C2H1g17085 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| CX1g003333 | 1:31,661,149-31,664,246 | + | C1H1g07003 | C2H1g00983 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| CX1g005332 | 1:31,665,427-31,666,093 | + | C1H1g07552 | C2H1g24837 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| CX1g001176 | 1:31,667,096-31,669,907 | - | C1H1g26345 | C2H1g22767 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| CX1g006671 | 1:31,670,816-31,670,983 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g000140 | 1:31,671,816-31,672,789 | - | C1H1g02922 | C2H1g05497 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| CX1g003313 | 1:31,673,851-31,679,411 | - | C1H1g09497 | C2H1g26726 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| CX1g001620 | 1:31,678,033-31,678,635 | + | - | - | - | Os01g0833750 | - | Detail |