| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g01754 | 6:10,139,922-10,141,873 | - | C2H6g17713 | CX6g045899 | - | Os08g0511500 | - | Detail |
| C1H6g06107 | 6:10,142,777-10,143,586 | - | C2H6g16311 | CX6g044712 | LOC_Os06g21099 | Os06g0315900 | - | Detail |
| C1H6g26290 | 6:10,164,789-10,168,876 | + | C2H6g11843 | CX6g042271 | LOC_Os06g21020 | Os06g0315300 | - | Detail |
| C1H6g02520 | 6:10,191,419-10,194,508 | + | C2H6g02777 | CX6g043063 | LOC_Os06g20960 | Os06g0315000 | - | Detail |
| C1H6g01312 | 6:10,214,017-10,215,376 | - | C2H6g08304 | - | - | - | - | Detail |
| C1H6g01173 | 6:10,219,052-10,226,375 | + | C2H6g00055 | CX6g045108 | LOC_Os06g20920 | Os06g0314600 | - | Detail |
| C1H6g06141 | 6:10,258,313-10,261,071 | + | C2H6g28978 | CX6g041754 | LOC_Os06g20860 | Os06g0314000 | - | Detail |
| C1H6g07131 | 6:10,301,722-10,302,446 | + | C2H6g04157 | CX6g042347 | LOC_Os06g20820 | Os06g0317600 | - | Detail |
| C1H6g28638 | 6:10,316,067-10,317,056 | + | C2H6g20819 | CX6g041954 | LOC_Os06g20790 | Os06g0313440 | - | Detail |
| C1H6g19675 | 6:10,317,467-10,318,453 | + | C2H6g05693 | - | - | - | - | Detail |
| C1H6g28926 | 6:10,341,623-10,346,278 | + | C2H6g23703 | CX6g044543 | LOC_Os06g20630 | Os06g0311800 | - | Detail |
| C1H6g20620 | 6:10,398,686-10,399,153 | + | C2H6g30321 | CX6g043740 | LOC_Os06g20630 | Os06g0311800 | - | Detail |
| C1H6g27381 | 6:10,399,798-10,400,989 | + | C2H6g23703 | CX6g044543 | LOC_Os06g20630 | Os06g0311800 | - | Detail |
| C1H6g21322 | 6:10,407,369-10,411,388 | - | C2H6g07641 | CX6g041490 | LOC_Os06g20620 | Os06g0311600 | - | Detail |
| C1H6g20026 | 6:10,415,523-10,420,003 | - | C2H6g23118 | CX6g041843 | LOC_Os06g20610 | Os06g0311300 | - | Detail |
| C1H6g14945 | 6:10,440,936-10,444,436 | + | C2H6g16425 | CX6g045706 | LOC_Os06g20570 | Os06g0311000 | - | Detail |
| C1H6g07803 | 6:10,455,103-10,459,049 | + | C2H6g03740 | CX6g044704 | LOC_Os06g20430 | Os06g0309200 | - | Detail |
| C1H6g21034 | 6:10,463,291-10,471,069 | + | C2H6g20900 | CX6g045162 | LOC_Os06g20410 | Os06g0309000 | - | Detail |
| C1H6g05261 | 6:10,474,492-10,478,272 | + | C2H6g24732 | CX6g043173 | LOC_Os06g20400 | Os06g0308900 | - | Detail |
| C1H6g27634 | 6:10,479,872-10,485,123 | - | C2H6g14579 | CX6g043037 | LOC_Os06g20390 | Os06g0308800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001275 | 1:31,558,445-31,559,020 | - | C1H1g19774 | C2H1g08171 | LOC_Os01g61470 | Os01g0830900 | - | Detail |
| CX1g002960 | 1:31,570,249-31,570,923 | + | C1H1g14773 | C2H1g07733 | LOC_Os01g61480 | Os01g0831000 | LAX1, lax, lax(lx), LAX1, lx, OsbHLH123 | Detail |
| CX1g003525 | 1:31,574,958-31,577,885 | + | C1H1g29926 | C2H1g10096 | LOC_Os01g61500 | Os01g0831200 | OsBAG4, EIP1 | Detail |
| CX1g003586 | 1:31,578,531-31,580,750 | - | C1H1g29563 | C2H1g19797 | LOC_Os01g61510 | Os01g0831300 | - | Detail |
| CX1g004163 | 1:31,583,546-31,585,240 | - | C1H1g16875 | C2H1g10064 | LOC_Os01g61550 | Os01g0831900 | - | Detail |
| CX1g006982 | 1:31,587,574-31,590,372 | - | C1H1g09267 | C2H1g01874 | LOC_Os01g61560 | Os01g0832000 | CDS5, OsCDS5 | Detail |
| CX1g004599 | 1:31,592,088-31,593,891 | + | C1H1g18254 | C2H1g04373 | LOC_Os01g61570 | Os01g0832100 | - | Detail |
| CX1g001311 | 1:31,596,164-31,599,484 | - | C1H1g00383 | C2H1g19266 | LOC_Os01g61580 | Os01g0832200 | - | Detail |
| CX1g004790 | 1:31,603,549-31,609,170 | + | C1H1g00574 | C2H1g14897 | LOC_Os01g61590 | Os01g0832300 | OsCPK3 | Detail |
| CX1g000601 | 1:31,624,769-31,629,009 | + | C1H1g31694 | C2H1g11131 | LOC_Os01g61610 | Os01g0832600 | - | Detail |
| CX1g006439 | 1:31,645,680-31,650,498 | + | C1H1g07002 | C2H1g22191 | LOC_Os01g61620 | Os01g0832900 | - | Detail |
| CX1g006609 | 1:31,651,243-31,653,240 | + | C1H1g10107 | C2H1g03571 | LOC_Os01g61630 | Os01g0833000 | - | Detail |
| CX1g003404 | 1:31,653,858-31,656,164 | - | C1H1g13635 | C2H1g17085 | LOC_Os01g61640 | Os01g0833100 | - | Detail |
| CX1g003333 | 1:31,661,149-31,664,246 | + | C1H1g07003 | C2H1g00983 | LOC_Os01g61670 | Os01g0833200 | - | Detail |
| CX1g005332 | 1:31,665,427-31,666,093 | + | C1H1g07552 | C2H1g24837 | LOC_Os01g61680 | Os01g0833400 | - | Detail |
| CX1g001176 | 1:31,667,096-31,669,907 | - | C1H1g26345 | C2H1g22767 | LOC_Os01g61690 | Os01g0833500 | - | Detail |
| CX1g006671 | 1:31,670,816-31,670,983 | - | - | - | - | Os01g0728000 | - | Detail |
| CX1g000140 | 1:31,671,816-31,672,789 | - | C1H1g02922 | C2H1g05497 | LOC_Os01g61700 | Os01g0833600 | - | Detail |
| CX1g003313 | 1:31,673,851-31,679,411 | - | C1H1g09497 | C2H1g26726 | LOC_Os01g61710 | Os01g0833700 | - | Detail |
| CX1g001620 | 1:31,678,033-31,678,635 | + | - | - | - | Os01g0833750 | - | Detail |