| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g23727 | 6:1,154,556-1,156,689 | + | C1H6g21967 | CX6g044602 | LOC_Os06g04080 | Os06g0131500 | - | Detail |
| C2H6g24358 | 6:1,162,866-1,166,381 | - | C1H6g10070 | CX6g041745 | LOC_Os06g04090 | Os06g0131700 | - | Detail |
| C2H6g10300 | 6:1,184,169-1,185,533 | - | - | CX6g042310 | LOC_Os06g04130 | Os06g0132100 | - | Detail |
| C2H6g28984 | 6:1,187,456-1,188,025 | - | C1H6g21299 | CX6g043564 | LOC_Os06g04140 | Os06g0132300 | - | Detail |
| C2H6g09752 | 6:1,188,834-1,189,814 | - | C1H6g21299 | CX6g044687 | LOC_Os06g04150 | Os06g0132400 | YGL18, ChlM | Detail |
| C2H6g08599 | 6:1,191,519-1,197,341 | - | C1H6g23000 | CX6g044041 | LOC_Os06g04169 | Os06g0132500 | OsBDG | Detail |
| C2H6g25055 | 6:1,211,402-1,215,328 | - | C1H6g17422 | CX6g041905 | LOC_Os06g04190 | Os06g0132600 | OsRAD1, RAD1 | Detail |
| C2H6g03148 | 6:1,218,691-1,223,612 | + | C1H6g23540 | CX6g043331 | LOC_Os06g04200 | Os06g0133000 | WX1, wx (Wx(am)), Wx, WX-B, GBSS-I, GBSS, OsGBSSI, GBSS1, OsGBSS1, GBSSI | Detail |
| C2H6g22217 | 6:1,226,616-1,226,912 | + | - | CX6g043924 | LOC_Os06g04210 | Os06g0133200 | - | Detail |
| C2H6g28022 | 6:1,230,375-1,230,659 | + | - | CX6g044984 | LOC_Os06g04220 | Os06g0133300 | - | Detail |
| C2H6g14484 | 6:1,233,911-1,234,174 | + | C1H6g09083 | CX6g042298 | LOC_Os06g04230 | Os06g0133400 | - | Detail |
| C2H6g03555 | 6:1,235,005-1,235,286 | - | C1H6g09083 | CX6g042298 | LOC_Os06g04240 | Os06g0133500 | - | Detail |
| C2H6g25685 | 6:1,241,084-1,242,151 | + | - | CX6g042617 | LOC_Os06g04250 | Os06g0133600 | - | Detail |
| C2H6g05959 | 6:1,257,209-1,259,084 | + | C1H6g07345 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C2H6g30353 | 6:1,260,546-1,264,031 | - | C1H6g21882 | CX6g044476 | LOC_Os06g04270 | Os06g0133800 | - | Detail |
| C2H6g15004 | 6:1,267,478-1,271,368 | + | C1H6g02027 | CX6g044113 | LOC_Os06g04280 | Os06g0133900 | EPSPS, EPSPs, OsEPSPS | Detail |
| C2H6g06475 | 6:1,271,937-1,273,654 | - | C1H6g14754 | CX6g041350 | LOC_Os06g04290 | Os06g0134000 | - | Detail |
| C2H6g13486 | 6:1,274,602-1,276,735 | - | C1H6g07407 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C2H6g20989 | 6:1,276,836-1,277,219 | - | C1H6g07407 | CX6g045804 | LOC_Os06g04300 | Os06g0134050 | - | Detail |
| C2H6g29611 | 6:1,286,539-1,288,975 | - | C1H6g30767 | CX6g042141 | LOC_Os06g04330 | Os06g0134300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005200 | 1:2,872,441-2,876,269 | - | C1H1g09488 | C2H1g23637 | LOC_Os01g07140 | Os01g0165200 | - | Detail |
| CX1g002920 | 1:2,888,475-2,888,981 | + | - | C2H1g30286 | LOC_Os01g07150 | Os01g0165600 | - | Detail |
| CX1g001754 | 1:2,907,200-2,907,364 | + | - | - | - | - | - | Detail |
| CX1g007089 | 1:2,914,986-2,917,833 | + | C1H1g11655 | C2H1g08507 | LOC_Os01g07200 | Os01g0166100 | - | Detail |
| CX1g000925 | 1:2,918,615-2,919,085 | - | - | C2H1g28566 | - | Os01g0166200 | - | Detail |
| CX1g002009 | 1:2,918,702-2,920,936 | + | C1H1g25978 | C2H1g01020 | LOC_Os01g07212 | Os01g0166300 | - | Detail |
| CX1g006194 | 1:2,933,248-2,933,970 | - | - | C2H1g05149 | LOC_Os01g07240 | Os01g0166500 | - | Detail |
| CX1g000127 | 1:2,940,028-2,941,712 | + | C1H1g07427 | C2H1g02905 | LOC_Os01g07250 | Os01g0166700 | - | Detail |
| CX1g005999 | 1:2,942,484-2,946,022 | - | C1H1g26302 | C2H1g25257 | LOC_Os01g07260 | Os01g0166800 | - | Detail |
| CX1g001312 | 1:2,946,462-2,946,683 | + | C1H1g20393 | C2H1g06988 | - | Os01g0167100 | - | Detail |
| CX1g006992 | 1:2,968,927-2,969,730 | + | C1H1g04419 | C2H1g17311 | - | Os01g0167400 | - | Detail |
| CX1g004676 | 1:2,970,750-2,973,262 | - | C1H1g22310 | C2H1g15989 | LOC_Os01g07310 | Os01g0167500 | - | Detail |
| CX1g004086 | 1:2,978,448-2,979,534 | + | C1H1g19378 | C2H1g11597 | LOC_Os01g07320 | Os01g0167600 | - | Detail |
| CX1g005536 | 1:2,981,035-2,991,073 | - | C1H1g21201 | C2H1g08925 | LOC_Os01g07340 | Os01g0167750 | - | Detail |
| CX1g001588 | 1:2,992,294-2,995,257 | - | C1H1g22514 | C2H1g08657 | LOC_Os01g07350 | Os01g0167800 | - | Detail |
| CX1g004828 | 1:2,997,192-2,999,037 | - | C1H1g16535 | C2H1g00388 | LOC_Os01g07360 | Os01g0167900 | - | Detail |
| CX1g001191 | 1:3,002,838-3,004,780 | - | C1H1g01854 | C2H1g24620 | LOC_Os01g07370 | Os01g0168100 | - | Detail |
| CX1g003480 | 1:3,013,716-3,015,104 | - | C1H1g14782 | C2H1g00503 | LOC_Os01g07376 | Os01g0168200 | - | Detail |
| CX1g005935 | 1:3,017,226-3,020,273 | - | C1H1g01998 | C2H1g03327 | LOC_Os01g07382 | Os01g0168300 | - | Detail |
| CX1g007194 | 1:3,024,693-3,027,726 | + | C1H1g20548 | C2H1g07482 | LOC_Os01g07390 | Os01g0168400 | - | Detail |