| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g10053 | 4:22,556,566-22,561,222 | - | C2H4g00297 | CX4g034783 | LOC_Os04g43690 | Os04g0517300 | - | Detail |
| C1H4g19364 | 4:22,561,456-22,566,949 | + | C2H4g03267 | CX4g034365 | LOC_Os04g43700 | Os04g0517400 | - | Detail |
| C1H4g27983 | 4:22,570,379-22,571,379 | + | C2H4g18098 | CX4g036341 | LOC_Os04g43710 | Os04g0517500 | - | Detail |
| C1H4g02633 | 4:22,575,097-22,578,375 | - | C2H4g25250 | CX4g031725 | LOC_Os04g43730 | Os04g0517700 | - | Detail |
| C1H4g21239 | 4:22,584,597-22,588,168 | - | C2H4g18845 | CX4g032795 | LOC_Os04g43750 | Os04g0518000 | - | Detail |
| C1H4g17678 | 4:22,592,726-22,595,712 | - | C2H4g17450 | CX4g031424 | LOC_Os04g43760 | Os04g0518100 | - | Detail |
| C1H4g22637 | 4:22,601,648-22,604,291 | - | C2H4g28869 | CX4g031711 | LOC_Os04g43800 | Os04g0518400 | OsPAL6 | Detail |
| C1H4g07857 | 4:22,612,924-22,615,739 | - | C2H4g10523 | - | LOC_Os04g43824 | Os04g0518650 | - | Detail |
| C1H4g21094 | 4:22,624,582-22,628,348 | + | C2H4g12982 | CX4g035278 | LOC_Os04g43840 | Os04g0518800 | LABA1, LOGL6, OsLOGL6, An-2 | Detail |
| C1H4g30028 | 4:22,643,421-22,646,106 | + | C2H4g03913 | CX4g031681 | LOC_Os04g43910 | Os04g0519700 | ARF10, qSE4 | Detail |
| C1H4g09015 | 4:22,653,208-22,664,875 | - | C2H4g13261 | CX4g033896 | LOC_Os04g43916 | Os04g0519900 | - | Detail |
| C1H4g07978 | 4:22,665,750-22,670,307 | - | C2H4g00328 | CX4g033084 | LOC_Os04g43922 | Os04g0520000 | - | Detail |
| C1H4g29455 | 4:22,690,768-22,692,591 | + | C2H4g13133 | CX4g032514 | LOC_Os04g44060 | Os04g0521100 | OsPIP2;3 | Detail |
| C1H4g20974 | 4:22,693,342-22,693,635 | - | C2H4g21649 | - | - | - | - | Detail |
| C1H4g01962 | 4:22,693,922-22,694,944 | - | C2H4g30421 | - | - | - | - | Detail |
| C1H4g05956 | 4:22,697,067-22,697,330 | + | C2H4g17426 | CX4g034857 | LOC_Os04g44070 | Os04g0521300 | - | Detail |
| C1H4g04229 | 4:22,700,018-22,702,759 | + | C2H4g25112 | CX4g032134 | LOC_Os04g44090 | Os04g0521600 | - | Detail |
| C1H4g14520 | 4:22,706,368-22,709,546 | + | C2H4g19435 | CX4g031957 | LOC_Os04g44110 | Os04g0521800 | - | Detail |
| C1H4g13540 | 4:22,711,689-22,712,061 | + | C2H4g20077 | CX4g034351 | LOC_Os04g44130 | Os04g0522100 | CAL2 | Detail |
| C1H4g14130 | 4:22,727,345-22,728,093 | - | C2H4g17950 | CX4g035905 | LOC_Os04g44150 | Os04g0522500 | GA2ox6, OsGA2ox6 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005200 | 1:2,872,441-2,876,269 | - | C1H1g09488 | C2H1g23637 | LOC_Os01g07140 | Os01g0165200 | - | Detail |
| CX1g002920 | 1:2,888,475-2,888,981 | + | - | C2H1g30286 | LOC_Os01g07150 | Os01g0165600 | - | Detail |
| CX1g001754 | 1:2,907,200-2,907,364 | + | - | - | - | - | - | Detail |
| CX1g007089 | 1:2,914,986-2,917,833 | + | C1H1g11655 | C2H1g08507 | LOC_Os01g07200 | Os01g0166100 | - | Detail |
| CX1g000925 | 1:2,918,615-2,919,085 | - | - | C2H1g28566 | - | Os01g0166200 | - | Detail |
| CX1g002009 | 1:2,918,702-2,920,936 | + | C1H1g25978 | C2H1g01020 | LOC_Os01g07212 | Os01g0166300 | - | Detail |
| CX1g006194 | 1:2,933,248-2,933,970 | - | - | C2H1g05149 | LOC_Os01g07240 | Os01g0166500 | - | Detail |
| CX1g000127 | 1:2,940,028-2,941,712 | + | C1H1g07427 | C2H1g02905 | LOC_Os01g07250 | Os01g0166700 | - | Detail |
| CX1g005999 | 1:2,942,484-2,946,022 | - | C1H1g26302 | C2H1g25257 | LOC_Os01g07260 | Os01g0166800 | - | Detail |
| CX1g001312 | 1:2,946,462-2,946,683 | + | C1H1g20393 | C2H1g06988 | - | Os01g0167100 | - | Detail |
| CX1g006992 | 1:2,968,927-2,969,730 | + | C1H1g04419 | C2H1g17311 | - | Os01g0167400 | - | Detail |
| CX1g004676 | 1:2,970,750-2,973,262 | - | C1H1g22310 | C2H1g15989 | LOC_Os01g07310 | Os01g0167500 | - | Detail |
| CX1g004086 | 1:2,978,448-2,979,534 | + | C1H1g19378 | C2H1g11597 | LOC_Os01g07320 | Os01g0167600 | - | Detail |
| CX1g005536 | 1:2,981,035-2,991,073 | - | C1H1g21201 | C2H1g08925 | LOC_Os01g07340 | Os01g0167750 | - | Detail |
| CX1g001588 | 1:2,992,294-2,995,257 | - | C1H1g22514 | C2H1g08657 | LOC_Os01g07350 | Os01g0167800 | - | Detail |
| CX1g004828 | 1:2,997,192-2,999,037 | - | C1H1g16535 | C2H1g00388 | LOC_Os01g07360 | Os01g0167900 | - | Detail |
| CX1g001191 | 1:3,002,838-3,004,780 | - | C1H1g01854 | C2H1g24620 | LOC_Os01g07370 | Os01g0168100 | - | Detail |
| CX1g003480 | 1:3,013,716-3,015,104 | - | C1H1g14782 | C2H1g00503 | LOC_Os01g07376 | Os01g0168200 | - | Detail |
| CX1g005935 | 1:3,017,226-3,020,273 | - | C1H1g01998 | C2H1g03327 | LOC_Os01g07382 | Os01g0168300 | - | Detail |
| CX1g007194 | 1:3,024,693-3,027,726 | + | C1H1g20548 | C2H1g07482 | LOC_Os01g07390 | Os01g0168400 | - | Detail |