| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g20617 | 3:29,621,352-29,624,320 | - | C1H3g23563 | CX3g025581 | LOC_Os03g56790 | Os03g0780400 | OsADF2 | Detail |
| C2H3g18001 | 3:29,626,391-29,631,401 | + | C1H3g23600 | CX3g026219 | LOC_Os03g56800 | Os03g0780500 | - | Detail |
| C2H3g14864 | 3:29,631,995-29,635,002 | + | C1H3g17595 | CX3g030860 | LOC_Os03g56810 | Os03g0780600 | - | Detail |
| C2H3g09626 | 3:29,635,110-29,639,573 | + | - | - | - | - | - | Detail |
| C2H3g16433 | 3:29,641,852-29,643,226 | + | C1H3g26439 | CX3g026170 | LOC_Os03g56820 | Os03g0780800 | - | Detail |
| C2H3g03306 | 3:29,644,727-29,647,250 | - | C1H3g14922 | CX3g028624 | LOC_Os03g56830 | Os03g0780900 | - | Detail |
| C2H3g10423 | 3:29,649,468-29,652,876 | - | C1H3g04528 | CX3g030035 | LOC_Os03g56840 | Os03g0781000 | - | Detail |
| C2H3g00662 | 3:29,654,033-29,656,588 | + | C1H3g00697 | CX3g028006 | LOC_Os03g56850 | Os03g0781100 | - | Detail |
| C2H3g16006 | 3:29,658,702-29,659,389 | - | C1H3g00675 | CX3g031346 | LOC_Os03g56860 | Os03g0781300 | - | Detail |
| C2H3g09130 | 3:29,660,283-29,662,126 | - | C1H3g13066 | CX3g029784 | LOC_Os03g56869 | Os03g0781400 | - | Detail |
| C2H3g00286 | 3:29,664,701-29,668,083 | - | C1H3g04826 | CX3g025012 | LOC_Os03g56890 | Os03g0781600 | - | Detail |
| C2H3g19846 | 3:29,687,604-29,690,478 | + | C1H3g18147 | CX3g026212 | LOC_Os03g56950 | Os03g0782500 | PIL13, OsPIL1, OsPIL13, OsbHLH152 | Detail |
| C2H3g26278 | 3:29,697,094-29,699,728 | - | C1H3g10536 | CX3g026808 | LOC_Os03g56960 | Os03g0782900 | - | Detail |
| C2H3g17813 | 3:29,699,849-29,705,182 | + | C1H3g29435 | CX3g030659 | LOC_Os03g56970 | Os03g0783000 | - | Detail |
| C2H3g21267 | 3:29,717,486-29,720,085 | + | C1H3g09935 | - | LOC_Os03g56490 | Os03g0783100 | - | Detail |
| C2H3g27771 | 3:29,721,321-29,721,893 | + | C1H3g22666 | - | LOC_Os03g57010 | Os03g0783100 | - | Detail |
| C2H3g11026 | 3:29,763,753-29,765,490 | - | C1H3g16399 | CX3g026130 | LOC_Os03g57040 | Os03g0783700 | - | Detail |
| C2H3g20647 | 3:29,771,887-29,775,333 | + | C1H3g28995 | CX3g025168 | LOC_Os03g57070 | Os03g0784000 | - | Detail |
| C2H3g12289 | 3:29,780,651-29,782,256 | - | C1H3g19825 | CX3g027646 | LOC_Os03g57080 | Os03g0784100 | - | Detail |
| C2H3g18782 | 3:29,791,176-29,793,796 | - | C1H3g16412 | - | LOC_Os03g57090 | Os03g0784300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002001 | 1:31,438,323-31,439,939 | + | C1H1g29263 | C2H1g07991 | LOC_Os01g61190 | Os01g0827600 | - | Detail |
| CX1g007244 | 1:31,440,827-31,442,297 | - | C1H1g07860 | C2H1g10533 | LOC_Os01g61200 | Os01g0827700 | - | Detail |
| CX1g001942 | 1:31,445,276-31,445,896 | + | C1H1g02301 | C2H1g13011 | LOC_Os01g61210 | Os01g0827800 | - | Detail |
| CX1g000526 | 1:31,454,348-31,456,271 | + | C1H1g04351 | C2H1g00363 | LOC_Os01g61230 | Os01g0828100 | - | Detail |
| CX1g005049 | 1:31,457,309-31,458,947 | + | C1H1g01848 | C2H1g02486 | LOC_Os01g61240 | Os01g0828200 | - | Detail |
| CX1g002338 | 1:31,460,264-31,464,847 | + | C1H1g21043 | C2H1g25148 | LOC_Os01g61250 | Os01g0828300 | - | Detail |
| CX1g002334 | 1:31,478,340-31,478,981 | - | C1H1g18673 | - | LOC_Os01g61310 | Os01g0828900 | OsG1L7 | Detail |
| CX1g002824 | 1:31,482,381-31,488,559 | + | C1H1g24363 | C2H1g26560 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| CX1g006348 | 1:31,489,892-31,491,927 | - | C1H1g28117 | C2H1g01343 | LOC_Os01g61330 | Os01g0829100 | - | Detail |
| CX1g004300 | 1:31,496,982-31,497,167 | + | - | - | LOC_Os01g61335 | Os01g0829266 | - | Detail |
| CX1g002184 | 1:31,501,089-31,501,859 | + | C1H1g21582 | - | LOC_Os01g61350 | Os01g0829400 | - | Detail |
| CX1g006950 | 1:31,508,400-31,509,587 | - | C1H1g12640 | - | LOC_Os01g61370 | Os01g0829600 | - | Detail |
| CX1g006650 | 1:31,512,933-31,514,123 | + | C1H1g09215 | C2H1g05562 | LOC_Os01g61380 | Os01g0829800 | - | Detail |
| CX1g004731 | 1:31,514,776-31,517,350 | - | C1H1g13226 | C2H1g10105 | LOC_Os01g61390 | Os01g0829900 | YSL18, OsYSL18, OsYs2 | Detail |
| CX1g005073 | 1:31,518,401-31,521,066 | - | C1H1g03596 | C2H1g20100 | LOC_Os01g61400 | Os01g0830000 | - | Detail |
| CX1g003481 | 1:31,521,644-31,525,365 | + | C1H1g18571 | C2H1g21734 | LOC_Os01g61410 | Os01g0830100 | - | Detail |
| CX1g002466 | 1:31,528,006-31,529,568 | - | C1H1g15455 | C2H1g01891 | LOC_Os01g61420 | Os01g0830200 | - | Detail |
| CX1g003057 | 1:31,536,720-31,538,491 | - | C1H1g27297 | C2H1g16914 | LOC_Os01g61440 | Os01g0830500 | - | Detail |
| CX1g003372 | 1:31,539,472-31,539,624 | - | - | - | - | Os04g0385650 | - | Detail |
| CX1g005544 | 1:31,548,785-31,553,736 | + | C1H1g26608 | C2H1g20160 | LOC_Os01g61460 | Os01g0830700 | - | Detail |