| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g11863 | 11:19,117,603-19,121,425 | + | C1H11g01914 | CX11g011357 | LOC_Os11g36440 | Os11g0572700 | OsCRTISO, MHZ5, MHZ5/CRTISO, CRTISO | Detail |
| C2H11g13422 | 11:19,125,558-19,127,963 | - | C1H11g18936 | CX11g011222 | LOC_Os11g36450 | Os11g0572800 | JMJ710 | Detail |
| C2H11g26770 | 11:19,130,769-19,137,484 | - | C1H11g19358 | CX11g010869 | LOC_Os11g36880 | - | - | Detail |
| C2H11g29389 | 11:19,138,250-19,142,658 | - | C1H11g13497 | CX11g010869 | LOC_Os11g36890 | Os11g0577350 | - | Detail |
| C2H11g06789 | 11:19,147,613-19,163,472 | - | C1H11g26977 | CX11g013093 | LOC_Os11g36470 | Os11g0573000 | - | Detail |
| C2H11g21322 | 11:19,169,026-19,172,428 | + | C1H11g26926 | CX11g011761 | LOC_Os11g36480 | Os11g0573200 | - | Detail |
| C2H11g10839 | 11:19,197,783-19,200,808 | + | C1H11g24728 | CX11g011586 | LOC_Os11g36740 | Os11g0575900 | - | Detail |
| C2H11g22993 | 11:19,213,454-19,215,976 | + | - | CX11g013980 | LOC_Os11g36760 | Os11g0576100 | - | Detail |
| C2H11g27642 | 11:19,236,348-19,238,024 | + | C1H11g28846 | CX11g010880 | LOC_Os11g36790 | Os11g0576400 | - | Detail |
| C2H11g01112 | 11:19,245,667-19,251,021 | + | C1H11g25490 | CX11g011986 | LOC_Os11g36930 | Os11g0577700 | - | Detail |
| C2H11g02749 | 11:19,252,164-19,253,651 | + | C1H11g20417 | CX11g012965 | LOC_Os11g36940 | Os11g0577800 | - | Detail |
| C2H11g17082 | 11:19,254,574-19,258,082 | + | C1H11g23616 | CX11g014373 | LOC_Os11g36950 | - | - | Detail |
| C2H11g11502 | 11:19,259,245-19,259,987 | + | - | - | - | - | - | Detail |
| C2H11g22955 | 11:19,266,832-19,269,990 | + | C1H11g07221 | CX11g012558 | LOC_Os11g36960 | Os11g0578100 | - | Detail |
| C2H11g13105 | 11:19,281,747-19,284,724 | + | C1H11g04768 | CX11g012558 | LOC_Os11g36960 | Os11g0578225 | - | Detail |
| C2H11g08275 | 11:19,292,554-19,297,955 | + | C1H11g25485 | CX11g012558 | LOC_Os11g36560 | Os11g0578225 | - | Detail |
| C2H11g04234 | 11:19,303,003-19,303,613 | + | C1H11g25485 | CX11g012558 | LOC_Os11g36960 | Os11g0578250 | - | Detail |
| C2H11g04331 | 11:19,318,934-19,323,956 | + | C1H11g28830 | CX11g012546 | LOC_Os11g36520 | Os11g0578500 | - | Detail |
| C2H11g16636 | 11:19,328,125-19,329,357 | + | C1H11g25206 | CX11g012020 | LOC_Os11g37010 | Os11g0578700 | - | Detail |
| C2H11g25259 | 11:19,345,087-19,349,361 | + | C1H11g10451 | CX11g012003 | LOC_Os11g37050 | Os11g0579200 | ctp-1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002001 | 1:31,438,323-31,439,939 | + | C1H1g29263 | C2H1g07991 | LOC_Os01g61190 | Os01g0827600 | - | Detail |
| CX1g007244 | 1:31,440,827-31,442,297 | - | C1H1g07860 | C2H1g10533 | LOC_Os01g61200 | Os01g0827700 | - | Detail |
| CX1g001942 | 1:31,445,276-31,445,896 | + | C1H1g02301 | C2H1g13011 | LOC_Os01g61210 | Os01g0827800 | - | Detail |
| CX1g000526 | 1:31,454,348-31,456,271 | + | C1H1g04351 | C2H1g00363 | LOC_Os01g61230 | Os01g0828100 | - | Detail |
| CX1g005049 | 1:31,457,309-31,458,947 | + | C1H1g01848 | C2H1g02486 | LOC_Os01g61240 | Os01g0828200 | - | Detail |
| CX1g002338 | 1:31,460,264-31,464,847 | + | C1H1g21043 | C2H1g25148 | LOC_Os01g61250 | Os01g0828300 | - | Detail |
| CX1g002334 | 1:31,478,340-31,478,981 | - | C1H1g18673 | - | LOC_Os01g61310 | Os01g0828900 | OsG1L7 | Detail |
| CX1g002824 | 1:31,482,381-31,488,559 | + | C1H1g24363 | C2H1g26560 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| CX1g006348 | 1:31,489,892-31,491,927 | - | C1H1g28117 | C2H1g01343 | LOC_Os01g61330 | Os01g0829100 | - | Detail |
| CX1g004300 | 1:31,496,982-31,497,167 | + | - | - | LOC_Os01g61335 | Os01g0829266 | - | Detail |
| CX1g002184 | 1:31,501,089-31,501,859 | + | C1H1g21582 | - | LOC_Os01g61350 | Os01g0829400 | - | Detail |
| CX1g006950 | 1:31,508,400-31,509,587 | - | C1H1g12640 | - | LOC_Os01g61370 | Os01g0829600 | - | Detail |
| CX1g006650 | 1:31,512,933-31,514,123 | + | C1H1g09215 | C2H1g05562 | LOC_Os01g61380 | Os01g0829800 | - | Detail |
| CX1g004731 | 1:31,514,776-31,517,350 | - | C1H1g13226 | C2H1g10105 | LOC_Os01g61390 | Os01g0829900 | YSL18, OsYSL18, OsYs2 | Detail |
| CX1g005073 | 1:31,518,401-31,521,066 | - | C1H1g03596 | C2H1g20100 | LOC_Os01g61400 | Os01g0830000 | - | Detail |
| CX1g003481 | 1:31,521,644-31,525,365 | + | C1H1g18571 | C2H1g21734 | LOC_Os01g61410 | Os01g0830100 | - | Detail |
| CX1g002466 | 1:31,528,006-31,529,568 | - | C1H1g15455 | C2H1g01891 | LOC_Os01g61420 | Os01g0830200 | - | Detail |
| CX1g003057 | 1:31,536,720-31,538,491 | - | C1H1g27297 | C2H1g16914 | LOC_Os01g61440 | Os01g0830500 | - | Detail |
| CX1g003372 | 1:31,539,472-31,539,624 | - | - | - | - | Os04g0385650 | - | Detail |
| CX1g005544 | 1:31,548,785-31,553,736 | + | C1H1g26608 | C2H1g20160 | LOC_Os01g61460 | Os01g0830700 | - | Detail |