| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17584 | 9:16,227,376-16,231,932 | - | C2H9g17089 | CX9g056383 | LOC_Os09g32840 | Os09g0506000 | - | Detail |
| C1H9g11480 | 9:16,232,588-16,233,674 | - | C2H9g19754 | CX9g056383 | LOC_Os09g32850 | Os09g0506000 | - | Detail |
| C1H9g02458 | 9:16,243,775-16,251,404 | + | C2H9g05876 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C1H9g22232 | 9:16,253,974-16,257,754 | + | C2H9g29007 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C1H9g22572 | 9:16,278,858-16,283,611 | + | C2H9g16087 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C1H9g01976 | 9:16,292,089-16,298,116 | + | C2H9g24094 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C1H9g31066 | 9:16,300,450-16,302,607 | + | C2H9g09810 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C1H9g29777 | 9:16,309,681-16,311,328 | + | C2H9g27580 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C1H9g05594 | 9:16,312,804-16,315,162 | - | C2H9g28610 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C1H9g16500 | 9:16,316,280-16,318,154 | - | C2H9g13596 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C1H9g04875 | 9:16,319,832-16,321,966 | - | C2H9g15981 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C1H9g11387 | 9:16,330,137-16,332,059 | - | C2H9g02236 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C1H9g14135 | 9:16,332,984-16,337,749 | - | C2H9g17381 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C1H9g15525 | 9:16,338,424-16,342,156 | - | C2H9g06782 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C1H9g13578 | 9:16,342,199-16,342,928 | - | C2H9g02430 | - | - | - | - | Detail |
| C1H9g29300 | 9:16,346,052-16,347,908 | + | C2H9g16760 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C1H9g31398 | 9:16,362,768-16,364,213 | - | C2H9g18629 | CX9g056683 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C1H9g16740 | 9:16,364,627-16,372,015 | - | C2H9g21730 | CX9g057080 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| C1H9g22826 | 9:16,373,717-16,377,102 | - | C2H9g21730 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C1H9g05421 | 9:16,385,809-16,387,167 | + | C2H9g10967 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002001 | 1:31,438,323-31,439,939 | + | C1H1g29263 | C2H1g07991 | LOC_Os01g61190 | Os01g0827600 | - | Detail |
| CX1g007244 | 1:31,440,827-31,442,297 | - | C1H1g07860 | C2H1g10533 | LOC_Os01g61200 | Os01g0827700 | - | Detail |
| CX1g001942 | 1:31,445,276-31,445,896 | + | C1H1g02301 | C2H1g13011 | LOC_Os01g61210 | Os01g0827800 | - | Detail |
| CX1g000526 | 1:31,454,348-31,456,271 | + | C1H1g04351 | C2H1g00363 | LOC_Os01g61230 | Os01g0828100 | - | Detail |
| CX1g005049 | 1:31,457,309-31,458,947 | + | C1H1g01848 | C2H1g02486 | LOC_Os01g61240 | Os01g0828200 | - | Detail |
| CX1g002338 | 1:31,460,264-31,464,847 | + | C1H1g21043 | C2H1g25148 | LOC_Os01g61250 | Os01g0828300 | - | Detail |
| CX1g002334 | 1:31,478,340-31,478,981 | - | C1H1g18673 | - | LOC_Os01g61310 | Os01g0828900 | OsG1L7 | Detail |
| CX1g002824 | 1:31,482,381-31,488,559 | + | C1H1g24363 | C2H1g26560 | LOC_Os01g61320 | Os01g0829000 | - | Detail |
| CX1g006348 | 1:31,489,892-31,491,927 | - | C1H1g28117 | C2H1g01343 | LOC_Os01g61330 | Os01g0829100 | - | Detail |
| CX1g004300 | 1:31,496,982-31,497,167 | + | - | - | LOC_Os01g61335 | Os01g0829266 | - | Detail |
| CX1g002184 | 1:31,501,089-31,501,859 | + | C1H1g21582 | - | LOC_Os01g61350 | Os01g0829400 | - | Detail |
| CX1g006950 | 1:31,508,400-31,509,587 | - | C1H1g12640 | - | LOC_Os01g61370 | Os01g0829600 | - | Detail |
| CX1g006650 | 1:31,512,933-31,514,123 | + | C1H1g09215 | C2H1g05562 | LOC_Os01g61380 | Os01g0829800 | - | Detail |
| CX1g004731 | 1:31,514,776-31,517,350 | - | C1H1g13226 | C2H1g10105 | LOC_Os01g61390 | Os01g0829900 | YSL18, OsYSL18, OsYs2 | Detail |
| CX1g005073 | 1:31,518,401-31,521,066 | - | C1H1g03596 | C2H1g20100 | LOC_Os01g61400 | Os01g0830000 | - | Detail |
| CX1g003481 | 1:31,521,644-31,525,365 | + | C1H1g18571 | C2H1g21734 | LOC_Os01g61410 | Os01g0830100 | - | Detail |
| CX1g002466 | 1:31,528,006-31,529,568 | - | C1H1g15455 | C2H1g01891 | LOC_Os01g61420 | Os01g0830200 | - | Detail |
| CX1g003057 | 1:31,536,720-31,538,491 | - | C1H1g27297 | C2H1g16914 | LOC_Os01g61440 | Os01g0830500 | - | Detail |
| CX1g003372 | 1:31,539,472-31,539,624 | - | - | - | - | Os04g0385650 | - | Detail |
| CX1g005544 | 1:31,548,785-31,553,736 | + | C1H1g26608 | C2H1g20160 | LOC_Os01g61460 | Os01g0830700 | - | Detail |