| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14276 | 6:2,409,330-2,409,740 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g13336 | 6:2,410,289-2,410,699 | + | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g17841 | 6:2,411,428-2,412,749 | - | C1H6g10484 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g26766 | 6:2,412,783-2,413,085 | - | C1H6g06000 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g20170 | 6:2,415,673-2,419,060 | - | C1H6g16222 | CX6g044314 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| C2H6g19792 | 6:2,425,862-2,428,256 | - | C1H6g16022 | CX6g045401 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| C2H6g23161 | 6:2,429,699-2,437,037 | - | C1H6g13902 | CX6g043739 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| C2H6g04920 | 6:2,440,742-2,441,143 | - | - | CX6g042247 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| C2H6g21185 | 6:2,447,612-2,448,320 | + | C1H6g16824 | CX6g043772 | LOC_Os06g06610 | Os06g0161400 | - | Detail |
| C2H6g23055 | 6:2,459,795-2,461,268 | + | C1H6g25939 | CX6g045596 | LOC_Os06g06660 | Os06g0161800 | - | Detail |
| C2H6g19839 | 6:2,463,500-2,464,735 | + | C1H6g28340 | CX6g045596 | LOC_Os06g06670 | Os06g0161900 | - | Detail |
| C2H6g03972 | 6:2,466,564-2,467,051 | + | C1H6g28340 | - | - | - | - | Detail |
| C2H6g09639 | 6:2,467,292-2,468,545 | + | C1H6g29965 | CX6g045596 | LOC_Os06g06680 | Os06g0162100 | - | Detail |
| C2H6g11445 | 6:2,472,834-2,473,430 | + | C1H6g29965 | - | LOC_Os06g06580 | Os06g0161100 | - | Detail |
| C2H6g23738 | 6:2,491,525-2,493,444 | + | C1H6g05484 | CX6g045922 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| C2H6g27712 | 6:2,494,006-2,505,037 | - | C1H6g16792 | CX6g045009 | LOC_Os06g06730 | Os06g0162550 | OsZAS2 | Detail |
| C2H6g18003 | 6:2,506,220-2,508,521 | + | C1H6g20899 | CX6g044673 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| C2H6g28937 | 6:2,509,188-2,515,333 | - | C1H6g08500 | CX6g042913 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| C2H6g12221 | 6:2,520,562-2,521,083 | - | - | CX6g042202 | - | - | - | Detail |
| C2H6g12042 | 6:2,521,710-2,526,662 | - | C1H6g00041 | CX6g044205 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003469 | 1:31,311,422-31,312,858 | + | C1H1g23645 | C2H1g17727 | LOC_Os01g60900 | Os01g0824500 | OsEPFL9 | Detail |
| CX1g002737 | 1:31,317,086-31,321,332 | + | C1H1g18869 | C2H1g09957 | LOC_Os01g60910 | Os01g0824600 | - | Detail |
| CX1g003180 | 1:31,325,163-31,326,622 | + | C1H1g11676 | C2H1g16723 | LOC_Os01g60920 | Os01g0824700 | - | Detail |
| CX1g006995 | 1:31,329,292-31,331,676 | + | C1H1g20864 | C2H1g02718 | LOC_Os01g60930 | Os01g0824800 | - | Detail |
| CX1g005075 | 1:31,333,119-31,333,799 | + | C1H1g01275 | - | LOC_Os01g60940 | Os01g0824900 | - | Detail |
| CX1g007134 | 1:31,336,828-31,340,084 | + | C1H1g30844 | C2H1g11166 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| CX1g003391 | 1:31,357,428-31,359,414 | - | C1H1g30975 | C2H1g11491 | LOC_Os01g61010 | Os01g0825500 | - | Detail |
| CX1g000515 | 1:31,363,282-31,366,446 | - | C1H1g27805 | C2H1g02543 | LOC_Os01g61020 | Os01g0958200 | - | Detail |
| CX1g004445 | 1:31,368,480-31,372,451 | - | C1H1g04795 | C2H1g13725 | LOC_Os01g61030 | Os01g0825700 | - | Detail |
| CX1g002793 | 1:31,374,835-31,376,815 | - | C1H1g30003 | C2H1g15106 | LOC_Os01g61044 | Os01g0825800 | - | Detail |
| CX1g003706 | 1:31,382,318-31,384,785 | + | C1H1g18090 | C2H1g08505 | LOC_Os01g61070 | Os01g0826000 | OsATX | Detail |
| CX1g003149 | 1:31,391,201-31,391,356 | + | - | - | - | - | - | Detail |
| CX1g004814 | 1:31,402,365-31,404,523 | + | C1H1g02547 | C2H1g27828 | LOC_Os01g61080 | Os01g0826400 | OsWRKY24 | Detail |
| CX1g003105 | 1:31,408,400-31,408,915 | - | C1H1g25773 | - | LOC_Os05g39710 | Os01g0826800 | - | Detail |
| CX1g006758 | 1:31,414,074-31,414,268 | - | - | - | - | - | - | Detail |
| CX1g004110 | 1:31,416,490-31,421,443 | - | C1H1g20253 | C2H1g22369 | LOC_Os01g61120 | Os01g0826900 | - | Detail |
| CX1g005102 | 1:31,423,273-31,426,209 | - | C1H1g11730 | C2H1g22962 | LOC_Os01g61150 | Os01g0827200 | - | Detail |
| CX1g005055 | 1:31,428,735-31,430,918 | + | C1H1g13234 | C2H1g11237 | LOC_Os01g61160 | Os01g0827300 | OsChI1 | Detail |
| CX1g000110 | 1:31,432,967-31,433,635 | - | C1H1g28329 | - | LOC_Os01g61170 | Os01g0827400 | - | Detail |
| CX1g001550 | 1:31,434,550-31,436,508 | + | C1H1g29263 | C2H1g27943 | LOC_Os01g61180 | Os01g0827500 | OsExo70B1 | Detail |