| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g11764 | 3:10,956,693-10,961,163 | - | C2H3g10583 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C1H3g02450 | 3:10,968,065-10,973,057 | + | C2H3g24190 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C1H3g13994 | 3:10,973,249-10,978,463 | - | C2H3g30311 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C1H3g12459 | 3:10,978,644-10,988,938 | + | C2H3g26938 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C1H3g29664 | 3:10,990,193-10,992,877 | + | C2H3g19269 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C1H3g30788 | 3:10,997,102-11,001,582 | + | C2H3g24047 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C1H3g06087 | 3:11,002,110-11,002,616 | + | C2H3g24886 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C1H3g12764 | 3:11,005,642-11,009,575 | - | C2H3g01911 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C1H3g24732 | 3:11,012,916-11,019,204 | + | C2H3g06072 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C1H3g12242 | 3:11,021,498-11,024,991 | + | C2H3g19486 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C1H3g12872 | 3:11,025,887-11,026,351 | - | C2H3g01471 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C1H3g04089 | 3:11,049,298-11,055,428 | + | C2H3g23114 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C1H3g19863 | 3:11,055,512-11,060,664 | - | C2H3g29675 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C1H3g05344 | 3:11,063,303-11,064,574 | + | C2H3g22866 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C1H3g04080 | 3:11,069,158-11,070,960 | + | C2H3g03886 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C1H3g28568 | 3:11,077,899-11,078,735 | - | - | - | - | - | - | Detail |
| C1H3g16339 | 3:11,078,444-11,078,689 | + | C2H3g08004 | CX3g030092 | - | Os07g0676800 | - | Detail |
| C1H3g19042 | 3:11,081,184-11,087,685 | + | C2H3g20974 | CX3g026559 | LOC_Os03g21720 | Os03g0335300 | - | Detail |
| C1H3g07741 | 3:11,090,089-11,093,974 | + | C2H3g19361 | CX3g030985 | LOC_Os03g21730 | Os03g0335500 | - | Detail |
| C1H3g12959 | 3:11,104,908-11,115,051 | - | C2H3g14995 | CX3g025822 | LOC_Os03g02100 | Os03g0694900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g003469 | 1:31,311,422-31,312,858 | + | C1H1g23645 | C2H1g17727 | LOC_Os01g60900 | Os01g0824500 | OsEPFL9 | Detail |
| CX1g002737 | 1:31,317,086-31,321,332 | + | C1H1g18869 | C2H1g09957 | LOC_Os01g60910 | Os01g0824600 | - | Detail |
| CX1g003180 | 1:31,325,163-31,326,622 | + | C1H1g11676 | C2H1g16723 | LOC_Os01g60920 | Os01g0824700 | - | Detail |
| CX1g006995 | 1:31,329,292-31,331,676 | + | C1H1g20864 | C2H1g02718 | LOC_Os01g60930 | Os01g0824800 | - | Detail |
| CX1g005075 | 1:31,333,119-31,333,799 | + | C1H1g01275 | - | LOC_Os01g60940 | Os01g0824900 | - | Detail |
| CX1g007134 | 1:31,336,828-31,340,084 | + | C1H1g30844 | C2H1g11166 | LOC_Os01g60960 | Os01g0825000 | LBD1-8 | Detail |
| CX1g003391 | 1:31,357,428-31,359,414 | - | C1H1g30975 | C2H1g11491 | LOC_Os01g61010 | Os01g0825500 | - | Detail |
| CX1g000515 | 1:31,363,282-31,366,446 | - | C1H1g27805 | C2H1g02543 | LOC_Os01g61020 | Os01g0958200 | - | Detail |
| CX1g004445 | 1:31,368,480-31,372,451 | - | C1H1g04795 | C2H1g13725 | LOC_Os01g61030 | Os01g0825700 | - | Detail |
| CX1g002793 | 1:31,374,835-31,376,815 | - | C1H1g30003 | C2H1g15106 | LOC_Os01g61044 | Os01g0825800 | - | Detail |
| CX1g003706 | 1:31,382,318-31,384,785 | + | C1H1g18090 | C2H1g08505 | LOC_Os01g61070 | Os01g0826000 | OsATX | Detail |
| CX1g003149 | 1:31,391,201-31,391,356 | + | - | - | - | - | - | Detail |
| CX1g004814 | 1:31,402,365-31,404,523 | + | C1H1g02547 | C2H1g27828 | LOC_Os01g61080 | Os01g0826400 | OsWRKY24 | Detail |
| CX1g003105 | 1:31,408,400-31,408,915 | - | C1H1g25773 | - | LOC_Os05g39710 | Os01g0826800 | - | Detail |
| CX1g006758 | 1:31,414,074-31,414,268 | - | - | - | - | - | - | Detail |
| CX1g004110 | 1:31,416,490-31,421,443 | - | C1H1g20253 | C2H1g22369 | LOC_Os01g61120 | Os01g0826900 | - | Detail |
| CX1g005102 | 1:31,423,273-31,426,209 | - | C1H1g11730 | C2H1g22962 | LOC_Os01g61150 | Os01g0827200 | - | Detail |
| CX1g005055 | 1:31,428,735-31,430,918 | + | C1H1g13234 | C2H1g11237 | LOC_Os01g61160 | Os01g0827300 | OsChI1 | Detail |
| CX1g000110 | 1:31,432,967-31,433,635 | - | C1H1g28329 | - | LOC_Os01g61170 | Os01g0827400 | - | Detail |
| CX1g001550 | 1:31,434,550-31,436,508 | + | C1H1g29263 | C2H1g27943 | LOC_Os01g61180 | Os01g0827500 | OsExo70B1 | Detail |