| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g05791 | 2:29,312,727-29,318,506 | + | C2H2g01003 | CX2g019523 | LOC_Os02g52340 | Os02g0761000 | OsMADS22 | Detail |
| C1H2g08434 | 2:29,322,664-29,326,512 | + | C2H2g29434 | CX2g020420 | LOC_Os02g52360 | Os02g0761100 | - | Detail |
| C1H2g05177 | 2:29,327,293-29,330,629 | - | C2H2g03547 | CX2g022567 | LOC_Os02g52370 | Os02g0761200 | - | Detail |
| C1H2g24424 | 2:29,337,174-29,344,370 | + | C2H2g23284 | CX2g024166 | LOC_Os02g52390 | Os02g0761400 | - | Detail |
| C1H2g28697 | 2:29,346,278-29,349,162 | - | C2H2g11036 | CX2g023443 | LOC_Os02g52410 | Os02g0761600 | - | Detail |
| C1H2g22121 | 2:29,350,238-29,354,480 | - | C2H2g07632 | CX2g023652 | - | Os02g0761700 | - | Detail |
| C1H2g29643 | 2:29,367,517-29,370,525 | - | C2H2g21732 | CX2g024296 | LOC_Os02g52460 | Os02g0762200 | - | Detail |
| C1H2g11756 | 2:29,372,254-29,375,110 | - | C2H2g01308 | CX2g023185 | LOC_Os02g52470 | Os02g0762300 | - | Detail |
| C1H2g24237 | 2:29,391,213-29,392,967 | + | C2H2g06482 | CX2g020266 | LOC_Os02g52480 | Os02g0762400 | KRP1, OsiICK1, Orysa;KRP1, OrysaICK1, Orysa;ICK1, CDKI | Detail |
| C1H2g04159 | 2:29,405,081-29,413,827 | - | C2H2g29446 | CX2g022518 | LOC_Os02g52510 | Os02g0762800 | OsRad54 | Detail |
| C1H2g10187 | 2:29,420,753-29,421,443 | + | C2H2g11954 | CX2g023141 | LOC_Os02g52550 | Os02g0763000 | OsCNR1, TGW2, OsFWL1 | Detail |
| C1H2g21759 | 2:29,433,020-29,433,551 | + | C2H2g00538 | - | - | - | - | Detail |
| C1H2g09761 | 2:29,436,601-29,439,828 | + | C2H2g18956 | CX2g024148 | LOC_Os02g52560 | Os02g0763200 | - | Detail |
| C1H2g15844 | 2:29,440,568-29,443,936 | + | C2H2g03175 | CX2g024148 | LOC_Os02g52590 | Os02g0763800 | - | Detail |
| C1H2g15324 | 2:29,444,183-29,445,478 | + | C2H2g23310 | - | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C1H2g26295 | 2:29,446,855-29,449,995 | + | C2H2g02605 | CX2g023343 | LOC_Os02g52610 | Os02g0763900 | - | Detail |
| C1H2g14291 | 2:29,453,223-29,455,812 | + | C2H2g18172 | CX2g019855 | LOC_Os02g52630 | Os02g0764200 | - | Detail |
| C1H2g16896 | 2:29,459,889-29,462,320 | + | C2H2g07475 | CX2g023343 | LOC_Os02g52640 | Os02g0764400 | - | Detail |
| C1H2g16728 | 2:29,462,612-29,464,435 | - | C2H2g26785 | CX2g022219 | LOC_Os02g52650 | Os02g0764500 | - | Detail |
| C1H2g10581 | 2:29,482,588-29,484,166 | + | C2H2g26543 | CX2g018991 | LOC_Os02g52700 | Os02g0765400 | Amy1C | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005753 | 1:30,959,768-30,960,418 | + | C1H1g18287 | C2H1g27953 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| CX1g000357 | 1:30,964,198-30,967,289 | + | C1H1g14583 | C2H1g17170 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| CX1g003723 | 1:30,968,011-30,971,302 | - | C1H1g28961 | C2H1g22450 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| CX1g005948 | 1:30,984,425-30,987,190 | + | C1H1g28985 | C2H1g03576 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| CX1g005236 | 1:30,991,476-30,992,942 | + | C1H1g10378 | C2H1g16399 | - | Os01g0818100 | - | Detail |
| CX1g005557 | 1:30,993,020-30,994,435 | - | C1H1g28906 | C2H1g28719 | LOC_Os01g60250 | Os01g0818200 | - | Detail |
| CX1g002867 | 1:30,999,887-31,000,144 | - | - | - | - | - | - | Detail |
| CX1g002636 | 1:31,003,473-31,006,349 | + | C1H1g09654 | C2H1g17192 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| CX1g003042 | 1:31,013,082-31,015,299 | + | C1H1g30151 | C2H1g08644 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| CX1g000179 | 1:31,018,612-31,028,796 | - | C1H1g03453 | C2H1g07956 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| CX1g001508 | 1:31,037,874-31,041,572 | + | C1H1g23393 | C2H1g24195 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| CX1g001054 | 1:31,048,981-31,051,243 | + | C1H1g05234 | C2H1g09435 | LOC_Os01g60330 | Os01g0819100 | - | Detail |
| CX1g000374 | 1:31,053,428-31,062,579 | - | C1H1g12246 | C2H1g27714 | LOC_Os01g60340 | Os01g0819200 | - | Detail |
| CX1g006603 | 1:31,065,586-31,068,214 | + | C1H1g15017 | C2H1g05140 | LOC_Os01g60410 | Os01g0819400 | - | Detail |
| CX1g004596 | 1:31,075,106-31,080,376 | + | C1H1g20991 | C2H1g25835 | LOC_Os01g60410 | Os01g0819400 | - | Detail |
| CX1g007124 | 1:31,086,701-31,088,189 | + | C1H1g24710 | C2H1g13567 | LOC_Os01g60420 | Os01g0819700 | - | Detail |
| CX1g003283 | 1:31,088,828-31,090,771 | + | C1H1g06480 | C2H1g19237 | LOC_Os01g60430 | Os01g0819800 | - | Detail |
| CX1g003819 | 1:31,091,561-31,101,415 | - | C1H1g14024 | C2H1g03997 | LOC_Os01g60440 | Os01g0819900 | - | Detail |
| CX1g002206 | 1:31,104,061-31,106,203 | - | C1H1g29861 | C2H1g18974 | LOC_Os01g60450 | Os01g0957600 | - | Detail |
| CX1g005434 | 1:31,108,647-31,111,293 | - | C1H1g23687 | C2H1g18974 | LOC_Os01g60450 | Os01g0700900 | SLB1, Os1900, CYP711A2 | Detail |