| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10005 | 2:28,207,592-28,213,840 | + | C2H2g04852 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| C1H2g07594 | 2:28,214,316-28,214,573 | - | C2H2g22765 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C1H2g14249 | 2:28,227,982-28,228,206 | + | C2H2g21919 | - | LOC_Os02g50450 | Os02g0737950 | - | Detail |
| C1H2g30478 | 2:28,228,722-28,229,055 | + | - | - | - | Os02g0737950 | - | Detail |
| C1H2g00500 | 2:28,261,361-28,267,274 | + | C2H2g16308 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C1H2g09387 | 2:28,276,045-28,279,625 | + | C2H2g12754 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C1H2g28406 | 2:28,287,671-28,297,491 | - | C2H2g25440 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C1H2g30401 | 2:28,297,507-28,297,704 | - | - | CX2g022539 | - | - | - | Detail |
| C1H2g06055 | 2:28,299,126-28,308,398 | + | C2H2g10338 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C1H2g22155 | 2:28,308,325-28,312,785 | - | C2H2g19070 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C1H2g19740 | 2:28,332,807-28,336,612 | - | C2H2g13279 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C1H2g02446 | 2:28,338,313-28,341,142 | - | C2H2g20599 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C1H2g01602 | 2:28,343,991-28,348,147 | - | C2H2g22496 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C1H2g14498 | 2:28,363,242-28,369,337 | - | C2H2g07910 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C1H2g26149 | 2:28,370,112-28,371,544 | - | C2H2g25866 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C1H2g27425 | 2:28,376,019-28,377,561 | + | C2H2g26692 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C1H2g04140 | 2:28,382,759-28,385,516 | - | C2H2g23006 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C1H2g20437 | 2:28,398,757-28,402,464 | + | C2H2g20295 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C1H2g04090 | 2:28,407,528-28,412,353 | + | C2H2g20379 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C1H2g03541 | 2:28,412,827-28,437,570 | - | C2H2g26992 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005753 | 1:30,959,768-30,960,418 | + | C1H1g18287 | C2H1g27953 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| CX1g000357 | 1:30,964,198-30,967,289 | + | C1H1g14583 | C2H1g17170 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| CX1g003723 | 1:30,968,011-30,971,302 | - | C1H1g28961 | C2H1g22450 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| CX1g005948 | 1:30,984,425-30,987,190 | + | C1H1g28985 | C2H1g03576 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| CX1g005236 | 1:30,991,476-30,992,942 | + | C1H1g10378 | C2H1g16399 | - | Os01g0818100 | - | Detail |
| CX1g005557 | 1:30,993,020-30,994,435 | - | C1H1g28906 | C2H1g28719 | LOC_Os01g60250 | Os01g0818200 | - | Detail |
| CX1g002867 | 1:30,999,887-31,000,144 | - | - | - | - | - | - | Detail |
| CX1g002636 | 1:31,003,473-31,006,349 | + | C1H1g09654 | C2H1g17192 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| CX1g003042 | 1:31,013,082-31,015,299 | + | C1H1g30151 | C2H1g08644 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| CX1g000179 | 1:31,018,612-31,028,796 | - | C1H1g03453 | C2H1g07956 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| CX1g001508 | 1:31,037,874-31,041,572 | + | C1H1g23393 | C2H1g24195 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| CX1g001054 | 1:31,048,981-31,051,243 | + | C1H1g05234 | C2H1g09435 | LOC_Os01g60330 | Os01g0819100 | - | Detail |
| CX1g000374 | 1:31,053,428-31,062,579 | - | C1H1g12246 | C2H1g27714 | LOC_Os01g60340 | Os01g0819200 | - | Detail |
| CX1g006603 | 1:31,065,586-31,068,214 | + | C1H1g15017 | C2H1g05140 | LOC_Os01g60410 | Os01g0819400 | - | Detail |
| CX1g004596 | 1:31,075,106-31,080,376 | + | C1H1g20991 | C2H1g25835 | LOC_Os01g60410 | Os01g0819400 | - | Detail |
| CX1g007124 | 1:31,086,701-31,088,189 | + | C1H1g24710 | C2H1g13567 | LOC_Os01g60420 | Os01g0819700 | - | Detail |
| CX1g003283 | 1:31,088,828-31,090,771 | + | C1H1g06480 | C2H1g19237 | LOC_Os01g60430 | Os01g0819800 | - | Detail |
| CX1g003819 | 1:31,091,561-31,101,415 | - | C1H1g14024 | C2H1g03997 | LOC_Os01g60440 | Os01g0819900 | - | Detail |
| CX1g002206 | 1:31,104,061-31,106,203 | - | C1H1g29861 | C2H1g18974 | LOC_Os01g60450 | Os01g0957600 | - | Detail |
| CX1g005434 | 1:31,108,647-31,111,293 | - | C1H1g23687 | C2H1g18974 | LOC_Os01g60450 | Os01g0700900 | SLB1, Os1900, CYP711A2 | Detail |