| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g06281 | 7:2,870,934-2,884,230 | - | C2H7g15677 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C1H7g10831 | 7:2,883,733-2,884,255 | + | - | - | - | Os07g0163066 | - | Detail |
| C1H7g03136 | 7:2,887,002-2,889,311 | - | C2H7g11414 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C1H7g06104 | 7:2,892,038-2,893,416 | - | C2H7g28250 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C1H7g10635 | 7:2,906,228-2,918,414 | + | C2H7g28897 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C1H7g30562 | 7:2,926,314-2,938,047 | + | C2H7g16342 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| C1H7g13389 | 7:2,942,767-2,948,162 | - | C2H7g12803 | CX7g046501 | LOC_Os07g06970 | Os07g0164000 | WAF1, waf1, waf1-1, waf1-2, HEN1 | Detail |
| C1H7g24937 | 7:2,949,503-2,958,519 | - | C2H7g02116 | CX7g046855 | LOC_Os07g06980 | Os07g0164100 | HDA704 | Detail |
| C1H7g12322 | 7:2,958,769-2,959,858 | + | C2H7g16406 | CX7g048709 | LOC_Os07g06990 | Os07g0164200 | - | Detail |
| C1H7g16672 | 7:2,959,938-2,963,936 | - | C2H7g19812 | CX7g048627 | LOC_Os07g07000 | Os07g0164300 | OsSYP131a | Detail |
| C1H7g03242 | 7:2,966,683-2,969,912 | + | C2H7g13004 | CX7g047735 | LOC_Os07g07010 | Os07g0164500 | - | Detail |
| C1H7g21914 | 7:2,972,390-2,973,941 | + | C2H7g29770 | CX7g048909 | LOC_Os07g07020 | Os07g0164600 | - | Detail |
| C1H7g10253 | 7:2,979,263-2,981,271 | + | C2H7g22158 | CX7g050369 | LOC_Os07g07040 | Os07g0164800 | - | Detail |
| C1H7g18807 | 7:2,982,037-2,989,129 | - | C2H7g29990 | CX7g048267 | LOC_Os07g07050 | Os07g0164900 | - | Detail |
| C1H7g00647 | 7:2,991,445-2,995,951 | + | C2H7g08797 | CX7g048340 | LOC_Os07g07060 | Os07g0165000 | - | Detail |
| C1H7g27659 | 7:2,996,482-2,999,586 | - | C2H7g24346 | CX7g049088 | LOC_Os07g07070 | Os07g0165100 | - | Detail |
| C1H7g00683 | 7:3,002,443-3,009,769 | - | C2H7g29244 | CX7g049607 | LOC_Os07g07080 | Os07g0165200 | - | Detail |
| C1H7g28591 | 7:3,018,602-3,020,127 | + | - | - | LOC_Os07g07094 | Os07g0165300 | - | Detail |
| C1H7g18135 | 7:3,021,815-3,023,696 | - | - | - | LOC_Os07g07150 | Os07g0165700 | - | Detail |
| C1H7g08593 | 7:3,045,478-3,046,564 | + | C2H7g28487 | CX7g046732 | LOC_Os07g07170 | Os07g0165900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005753 | 1:30,959,768-30,960,418 | + | C1H1g18287 | C2H1g27953 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| CX1g000357 | 1:30,964,198-30,967,289 | + | C1H1g14583 | C2H1g17170 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| CX1g003723 | 1:30,968,011-30,971,302 | - | C1H1g28961 | C2H1g22450 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| CX1g005948 | 1:30,984,425-30,987,190 | + | C1H1g28985 | C2H1g03576 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| CX1g005236 | 1:30,991,476-30,992,942 | + | C1H1g10378 | C2H1g16399 | - | Os01g0818100 | - | Detail |
| CX1g005557 | 1:30,993,020-30,994,435 | - | C1H1g28906 | C2H1g28719 | LOC_Os01g60250 | Os01g0818200 | - | Detail |
| CX1g002867 | 1:30,999,887-31,000,144 | - | - | - | - | - | - | Detail |
| CX1g002636 | 1:31,003,473-31,006,349 | + | C1H1g09654 | C2H1g17192 | LOC_Os01g60260 | Os01g0818300 | - | Detail |
| CX1g003042 | 1:31,013,082-31,015,299 | + | C1H1g30151 | C2H1g08644 | LOC_Os01g60270 | Os01g0818400 | - | Detail |
| CX1g000179 | 1:31,018,612-31,028,796 | - | C1H1g03453 | C2H1g07956 | LOC_Os01g60280 | Os01g0818700 | - | Detail |
| CX1g001508 | 1:31,037,874-31,041,572 | + | C1H1g23393 | C2H1g24195 | LOC_Os01g60309 | Os01g0819000 | - | Detail |
| CX1g001054 | 1:31,048,981-31,051,243 | + | C1H1g05234 | C2H1g09435 | LOC_Os01g60330 | Os01g0819100 | - | Detail |
| CX1g000374 | 1:31,053,428-31,062,579 | - | C1H1g12246 | C2H1g27714 | LOC_Os01g60340 | Os01g0819200 | - | Detail |
| CX1g006603 | 1:31,065,586-31,068,214 | + | C1H1g15017 | C2H1g05140 | LOC_Os01g60410 | Os01g0819400 | - | Detail |
| CX1g004596 | 1:31,075,106-31,080,376 | + | C1H1g20991 | C2H1g25835 | LOC_Os01g60410 | Os01g0819400 | - | Detail |
| CX1g007124 | 1:31,086,701-31,088,189 | + | C1H1g24710 | C2H1g13567 | LOC_Os01g60420 | Os01g0819700 | - | Detail |
| CX1g003283 | 1:31,088,828-31,090,771 | + | C1H1g06480 | C2H1g19237 | LOC_Os01g60430 | Os01g0819800 | - | Detail |
| CX1g003819 | 1:31,091,561-31,101,415 | - | C1H1g14024 | C2H1g03997 | LOC_Os01g60440 | Os01g0819900 | - | Detail |
| CX1g002206 | 1:31,104,061-31,106,203 | - | C1H1g29861 | C2H1g18974 | LOC_Os01g60450 | Os01g0957600 | - | Detail |
| CX1g005434 | 1:31,108,647-31,111,293 | - | C1H1g23687 | C2H1g18974 | LOC_Os01g60450 | Os01g0700900 | SLB1, Os1900, CYP711A2 | Detail |