| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g24734 | 2:27,612,549-27,617,206 | - | C2H2g15860 | CX2g024558 | LOC_Os02g49150 | Os02g0723300 | - | Detail |
| C1H2g24233 | 2:27,622,626-27,622,877 | + | C2H2g04081 | CX2g024533 | LOC_Os02g49160 | Os02g0723400 | - | Detail |
| C1H2g18213 | 2:27,623,315-27,623,663 | + | C2H2g20481 | CX2g024766 | LOC_Os02g49160 | Os02g0817600 | - | Detail |
| C1H2g16175 | 2:27,625,251-27,629,422 | - | C2H2g22851 | CX2g020430 | LOC_Os02g49180 | Os02g0723600 | - | Detail |
| C1H2g00870 | 2:27,629,824-27,632,226 | + | C2H2g17164 | CX2g020353 | LOC_Os02g49190 | Os02g0723700 | - | Detail |
| C1H2g20021 | 2:27,648,325-27,653,115 | + | C2H2g00357 | CX2g023328 | LOC_Os02g49230 | Os02g0724000 | DTH2, OsCCT08, OsBBX7, OsN | Detail |
| C1H2g09863 | 2:27,657,352-27,661,479 | + | C2H2g14057 | CX2g021258 | LOC_Os02g49260 | Os02g0724500 | - | Detail |
| C1H2g24655 | 2:27,662,296-27,667,448 | + | C2H2g00624 | CX2g020735 | LOC_Os02g49270 | Os02g0724600 | - | Detail |
| C1H2g20212 | 2:27,676,999-27,680,392 | + | C2H2g05357 | CX2g024361 | LOC_Os02g49310 | Os02g0725000 | OsAGC6 | Detail |
| C1H2g12743 | 2:27,682,032-27,685,766 | - | C2H2g11959 | CX2g021752 | LOC_Os02g49320 | Os02g0725100 | - | Detail |
| C1H2g25813 | 2:27,686,562-27,690,996 | + | C2H2g08115 | CX2g019231 | LOC_Os02g49326 | Os02g0725200 | - | Detail |
| C1H2g14119 | 2:27,691,109-27,694,572 | + | C2H2g27630 | CX2g023038 | LOC_Os02g49332 | Os02g0725300 | - | Detail |
| C1H2g16618 | 2:27,698,025-27,698,755 | - | C2H2g22284 | CX2g023830 | LOC_Os02g49350 | Os02g0725500 | - | Detail |
| C1H2g28453 | 2:27,699,390-27,701,648 | + | C2H2g23242 | CX2g023625 | LOC_Os02g49360 | Os02g0725600 | - | Detail |
| C1H2g10199 | 2:27,708,874-27,709,416 | - | C2H2g29177 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C1H2g22692 | 2:27,723,541-27,724,322 | + | - | - | - | - | - | Detail |
| C1H2g05214 | 2:27,736,753-27,740,170 | + | C2H2g05677 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C1H2g12431 | 2:27,744,500-27,748,577 | + | C2H2g30015 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C1H2g21836 | 2:27,752,289-27,753,196 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C1H2g06100 | 2:27,753,386-27,757,067 | - | C2H2g09813 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055596 | 9:19,836,602-19,841,006 | + | C1H9g10272 | C2H9g02081 | LOC_Os09g39640 | Os09g0570000 | - | Detail |
| CX9g055372 | 9:19,842,869-19,846,465 | + | C1H9g00135 | C2H9g26603 | LOC_Os09g39650 | Os09g0570100 | - | Detail |
| CX9g055018 | 9:19,848,115-19,851,176 | + | C1H9g20201 | C2H9g05032 | LOC_Os09g39660 | Os09g0570200 | - | Detail |
| CX9g057426 | 9:19,851,966-19,855,751 | + | C1H9g00132 | C2H9g16473 | LOC_Os09g39670 | Os09g0570300 | - | Detail |
| CX9g055288 | 9:19,856,618-19,860,176 | + | C1H9g11225 | C2H9g16630 | LOC_Os09g39680 | Os09g0570400 | OsPHT4;4 | Detail |
| CX9g056911 | 9:19,862,581-19,866,019 | + | C1H9g00104 | C2H9g09981 | LOC_Os09g39690 | Os09g0570500 | - | Detail |
| CX9g055103 | 9:19,867,330-19,871,180 | + | C1H9g21911 | C2H9g17141 | LOC_Os09g39700 | Os09g0570600 | - | Detail |
| CX9g055729 | 9:19,876,621-19,877,763 | + | C1H9g14809 | - | LOC_Os09g39720 | Os09g0570800 | SLC2 | Detail |
| CX9g057519 | 9:19,878,202-19,878,774 | - | C1H9g10742 | - | LOC_Os09g39730 | Os09g0570850 | - | Detail |
| CX9g057522 | 9:19,879,520-19,883,463 | - | C1H9g27323 | C2H9g29494 | LOC_Os09g39740 | Os09g0570900 | - | Detail |
| CX9g057568 | 9:19,886,039-19,887,846 | - | C1H9g16876 | C2H9g25303 | LOC_Os09g39750 | Os09g0571000 | - | Detail |
| CX9g055506 | 9:19,890,197-19,891,396 | + | C1H9g12880 | - | LOC_Os09g39760 | Os09g0571100 | - | Detail |
| CX9g057734 | 9:19,891,570-19,892,448 | - | C1H9g04184 | C2H9g19104 | LOC_Os09g39770 | Os09g0571200 | OsC2DP | Detail |
| CX9g056767 | 9:19,894,399-19,894,869 | + | C1H9g28799 | - | LOC_Os09g39780 | Os09g0571400 | OsCYP-25 | Detail |
| CX9g055064 | 9:19,895,543-19,898,013 | - | C1H9g20893 | C2H9g29216 | LOC_Os09g39790 | Os09g0571500 | - | Detail |
| CX9g056331 | 9:19,903,079-19,903,477 | - | C1H9g01571 | - | LOC_Os09g39810 | Os09g0571700 | - | Detail |
| CX9g057504 | 9:19,918,573-19,919,655 | - | C1H9g13129 | C2H9g18777 | LOC_Os09g39860 | Os09g0572100 | - | Detail |
| CX9g056110 | 9:19,921,109-19,924,654 | + | C1H9g22672 | C2H9g21329 | LOC_Os09g39870 | Os09g0572200 | - | Detail |
| CX9g055261 | 9:19,925,831-19,925,980 | + | - | - | - | - | - | Detail |
| CX9g055330 | 9:19,930,570-19,934,339 | - | C1H9g08753 | C2H9g18767 | LOC_Os09g39910 | Os09g0572400 | - | Detail |