| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29252 | 4:19,544,805-19,546,496 | + | C1H4g15796 | CX4g034372 | LOC_Os04g38010 | Os04g0453300 | OsSTP16 | Detail |
| C2H4g22075 | 4:19,546,579-19,551,684 | - | C1H4g03364 | CX4g033922 | LOC_Os04g38026 | Os04g0454200 | OsSTP18 | Detail |
| C2H4g01990 | 4:19,561,683-19,564,851 | - | C1H4g25156 | CX4g033922 | LOC_Os04g38026 | Os04g0452700 | OsMST1, OsSTP1 | Detail |
| C2H4g09683 | 4:19,569,068-19,573,322 | + | C1H4g04258 | CX4g033029 | LOC_Os04g38220 | Os04g0454200 | OsSTP18 | Detail |
| C2H4g14087 | 4:19,576,222-19,578,305 | + | C1H4g20229 | CX4g036291 | LOC_Os04g38300 | Os04g0388000 | - | Detail |
| C2H4g11570 | 4:19,578,510-19,580,621 | - | C1H6g07304 | - | - | - | - | Detail |
| C2H4g13957 | 4:19,580,637-19,581,104 | - | - | CX6g045756 | LOC_Os03g31160 | Os03g0425100 | - | Detail |
| C2H4g29729 | 4:19,581,775-19,582,314 | - | C1H4g07088 | CX4g036657 | LOC_Os04g38290 | Os04g0454600 | - | Detail |
| C2H4g13752 | 4:19,582,348-19,587,218 | - | C1H4g07088 | CX4g036657 | LOC_Os04g38290 | Os04g0454600 | - | Detail |
| C2H4g09229 | 4:19,597,247-19,600,744 | - | C1H4g01030 | CX4g032194 | LOC_Os04g38310 | Os04g0455600 | - | Detail |
| C2H4g18556 | 4:19,602,933-19,603,586 | - | C1H4g29223 | CX4g035883 | LOC_Os04g38320 | Os04g0455700 | - | Detail |
| C2H4g18168 | 4:19,605,131-19,608,515 | - | C1H4g03280 | CX4g035295 | LOC_Os04g38330 | Os04g0455800 | - | Detail |
| C2H4g00429 | 4:19,609,412-19,614,888 | - | C1H4g03811 | CX4g034220 | LOC_Os04g38340 | Os04g0455900 | - | Detail |
| C2H4g26079 | 4:19,617,557-19,618,222 | - | - | - | - | - | - | Detail |
| C2H4g11871 | 4:19,623,292-19,623,927 | + | C1H4g01343 | CX4g032706 | LOC_Os04g38360 | Os04g0456200 | - | Detail |
| C2H4g06670 | 4:19,631,001-19,631,616 | + | C1H4g04728 | CX4g031844 | LOC_Os04g38370 | Os04g0456300 | - | Detail |
| C2H4g02501 | 4:19,634,415-19,635,523 | + | C1H4g10291 | CX4g034632 | LOC_Os04g38390 | Os04g0456700 | - | Detail |
| C2H4g09656 | 4:19,642,421-19,644,335 | + | C1H4g13915 | CX4g033427 | LOC_Os04g38400 | Os04g0456900 | - | Detail |
| C2H4g04651 | 4:19,644,303-19,645,555 | - | C1H4g02678 | CX4g032431 | LOC_Os04g38410 | Os04g0457000 | - | Detail |
| C2H4g10829 | 4:19,646,884-19,648,869 | - | C1H4g15165 | CX4g034532 | LOC_Os04g38420 | Os04g0457200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055046 | 9:19,537,579-19,542,133 | - | C1H9g06523 | C2H9g06709 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| CX9g057500 | 9:19,546,906-19,551,859 | + | C1H9g19754 | C2H9g01538 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| CX9g054934 | 9:19,553,035-19,556,508 | + | C1H9g21219 | C2H9g16021 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| CX9g056918 | 9:19,566,866-19,569,751 | + | C1H9g01697 | C2H9g21433 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| CX9g057338 | 9:19,571,667-19,580,886 | - | C1H9g21274 | C2H9g26806 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| CX9g057061 | 9:19,573,431-19,574,024 | + | - | - | - | Os09g0563901 | - | Detail |
| CX9g057269 | 9:19,589,314-19,590,558 | - | C1H9g18913 | C2H9g05243 | LOC_Os09g39050 | Os09g0563950 | - | Detail |
| CX9g058103 | 9:19,631,433-19,634,360 | + | C1H9g06269 | C2H9g29707 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| CX9g055587 | 9:19,636,609-19,636,839 | + | - | - | - | - | - | Detail |
| CX9g055784 | 9:19,638,635-19,645,360 | - | C1H9g03665 | C2H9g17980 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| CX9g055878 | 9:19,647,664-19,652,960 | - | C1H9g23294 | C2H9g06735 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| CX9g056354 | 9:19,653,413-19,656,915 | - | C1H9g15519 | C2H9g29461 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| CX9g057714 | 9:19,658,969-19,675,899 | + | C1H9g26476 | C2H9g27919 | - | Os09g0565500 | - | Detail |
| CX9g057785 | 9:19,676,942-19,681,066 | + | C1H9g13374 | C2H9g07424 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| CX9g055093 | 9:19,682,901-19,684,106 | + | C1H9g26902 | C2H9g05946 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| CX9g057620 | 9:19,687,212-19,688,426 | + | C1H9g23958 | C2H9g19055 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| CX9g056260 | 9:19,690,320-19,695,576 | - | C1H9g25655 | C2H9g15395 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| CX9g056096 | 9:19,708,493-19,717,693 | - | C1H9g21987 | C2H9g09064 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| CX9g056849 | 9:19,727,863-19,731,483 | + | C1H9g04890 | C2H9g17992 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| CX9g058049 | 9:19,731,721-19,734,860 | + | C1H9g13266 | C2H9g25680 | LOC_Os09g39390 | Os09g0567366 | - | Detail |