| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g15283 | 1:7,809,141-7,814,353 | - | C1H1g11696 | CX1g001399 | LOC_Os01g15460 | Os01g0258700 | - | Detail |
| C2H1g09950 | 1:7,831,353-7,835,827 | + | C1H1g20506 | CX1g003110 | LOC_Os01g15470 | Os01g0259200 | - | Detail |
| C2H1g28752 | 1:7,839,649-7,847,498 | - | C1H1g17517 | CX1g001265 | LOC_Os01g15480 | Os01g0259400 | - | Detail |
| C2H1g29310 | 1:7,848,020-7,855,689 | - | C1H1g01918 | CX1g004135 | LOC_Os01g15490 | Os01g0259600 | - | Detail |
| C2H1g13360 | 1:7,865,841-7,869,695 | + | C1H1g28512 | CX1g001587 | LOC_Os01g15520 | Os01g0259900 | SAD1L | Detail |
| C2H1g29005 | 1:7,881,621-7,883,132 | + | C1H1g06480 | CX1g001422 | LOC_Os01g15530 | Os01g0260000 | - | Detail |
| C2H1g27356 | 1:7,883,984-7,890,551 | - | C1H1g08431 | CX1g003982 | LOC_Os01g15540 | Os01g0260100 | - | Detail |
| C2H1g20732 | 1:7,898,552-7,902,451 | + | C1H1g24472 | CX1g000418 | LOC_Os01g15580 | Os01g0260500 | - | Detail |
| C2H1g27729 | 1:7,908,196-7,911,965 | + | C1H1g25542 | CX1g006574 | LOC_Os01g15600 | Os01g0260700 | OsPurα | Detail |
| C2H1g08136 | 1:7,915,914-7,921,724 | + | C1H1g03478 | CX1g004819 | LOC_Os01g15610 | Os01g0260800 | OsCIF2 | Detail |
| C2H1g00172 | 1:7,925,619-7,926,041 | + | - | - | - | Os01g0260950 | - | Detail |
| C2H1g02816 | 1:7,928,299-7,934,071 | + | C1H1g30736 | CX1g004757 | LOC_Os01g15630 | Os01g0261100 | - | Detail |
| C2H1g13520 | 1:7,934,395-7,938,688 | - | C1H1g05155 | CX1g003663 | LOC_Os01g15640 | Os01g0261200 | - | Detail |
| C2H1g20114 | 1:7,943,990-7,947,448 | + | C1H1g07642 | CX1g001002 | LOC_Os01g15660 | Os01g0261500 | - | Detail |
| C2H1g06642 | 1:7,949,906-7,951,357 | - | C1H1g29935 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g12900 | 1:7,954,014-7,955,420 | - | C1H1g11248 | CX1g000782 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g12284 | 1:7,961,586-7,962,748 | - | C1H1g21194 | CX1g006778 | LOC_Os01g15709 | Os01g0261700 | - | Detail |
| C2H1g07674 | 1:7,977,804-7,979,718 | + | C1H1g29482 | CX1g000618 | LOC_Os01g15770 | Os01g0262500 | - | Detail |
| C2H1g00956 | 1:7,979,872-7,985,777 | - | C1H1g02857 | CX1g004525 | LOC_Os01g15780 | Os01g0262600 | OsGT1 | Detail |
| C2H1g29692 | 1:7,988,537-7,995,739 | + | C1H1g17535 | CX1g007017 | LOC_Os01g15790 | Os01g0262700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055046 | 9:19,537,579-19,542,133 | - | C1H9g06523 | C2H9g06709 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| CX9g057500 | 9:19,546,906-19,551,859 | + | C1H9g19754 | C2H9g01538 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| CX9g054934 | 9:19,553,035-19,556,508 | + | C1H9g21219 | C2H9g16021 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| CX9g056918 | 9:19,566,866-19,569,751 | + | C1H9g01697 | C2H9g21433 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| CX9g057338 | 9:19,571,667-19,580,886 | - | C1H9g21274 | C2H9g26806 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| CX9g057061 | 9:19,573,431-19,574,024 | + | - | - | - | Os09g0563901 | - | Detail |
| CX9g057269 | 9:19,589,314-19,590,558 | - | C1H9g18913 | C2H9g05243 | LOC_Os09g39050 | Os09g0563950 | - | Detail |
| CX9g058103 | 9:19,631,433-19,634,360 | + | C1H9g06269 | C2H9g29707 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| CX9g055587 | 9:19,636,609-19,636,839 | + | - | - | - | - | - | Detail |
| CX9g055784 | 9:19,638,635-19,645,360 | - | C1H9g03665 | C2H9g17980 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| CX9g055878 | 9:19,647,664-19,652,960 | - | C1H9g23294 | C2H9g06735 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| CX9g056354 | 9:19,653,413-19,656,915 | - | C1H9g15519 | C2H9g29461 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| CX9g057714 | 9:19,658,969-19,675,899 | + | C1H9g26476 | C2H9g27919 | - | Os09g0565500 | - | Detail |
| CX9g057785 | 9:19,676,942-19,681,066 | + | C1H9g13374 | C2H9g07424 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| CX9g055093 | 9:19,682,901-19,684,106 | + | C1H9g26902 | C2H9g05946 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| CX9g057620 | 9:19,687,212-19,688,426 | + | C1H9g23958 | C2H9g19055 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| CX9g056260 | 9:19,690,320-19,695,576 | - | C1H9g25655 | C2H9g15395 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| CX9g056096 | 9:19,708,493-19,717,693 | - | C1H9g21987 | C2H9g09064 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| CX9g056849 | 9:19,727,863-19,731,483 | + | C1H9g04890 | C2H9g17992 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| CX9g058049 | 9:19,731,721-19,734,860 | + | C1H9g13266 | C2H9g25680 | LOC_Os09g39390 | Os09g0567366 | - | Detail |