| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g05874 | 3:7,739,333-7,740,329 | + | - | - | LOC_Os03g13325 | - | - | Detail |
| C1H3g26269 | 3:7,743,125-7,745,957 | + | C2H3g28537 | CX3g025675 | LOC_Os03g15880 | Os03g0265500 | - | Detail |
| C1H3g21286 | 3:7,746,695-7,749,470 | - | C2H3g24360 | CX3g026951 | LOC_Os03g17060 | Os03g0265600 | - | Detail |
| C1H3g15389 | 3:7,752,512-7,763,079 | + | C2H3g26554 | CX3g030826 | LOC_Os03g15900 | Os03g0265700 | - | Detail |
| C1H3g08685 | 3:7,763,492-7,763,893 | + | C2H3g04049 | CX3g031044 | LOC_Os03g15910 | Os03g0265800 | - | Detail |
| C1H3g02041 | 3:7,764,185-7,765,551 | - | C2H3g14157 | CX3g030541 | LOC_Os03g15920 | Os03g0265900 | - | Detail |
| C1H3g28556 | 3:7,765,724-7,769,156 | + | C2H3g30510 | CX3g030784 | LOC_Os03g15930 | Os03g0266000 | - | Detail |
| C1H3g03702 | 3:7,771,986-7,773,906 | + | C2H3g30669 | CX3g027155 | LOC_Os03g15940 | Os03g0266100 | - | Detail |
| C1H3g31409 | 3:7,774,635-7,779,373 | - | C2H3g06090 | CX3g027025 | LOC_Os03g15950 | Os03g0266200 | - | Detail |
| C1H3g24708 | 3:7,779,907-7,780,383 | + | C2H3g29477 | CX3g028400 | LOC_Os03g16030 | Os03g0266300 | - | Detail |
| C1H3g06417 | 3:7,789,001-7,793,925 | + | C2H3g22167 | CX3g028150 | LOC_Os03g16000 | Os03g0266700 | - | Detail |
| C1H3g07398 | 3:7,796,165-7,802,033 | + | C2H3g11836 | CX3g028162 | LOC_Os03g16010 | Os03g0266800 | - | Detail |
| C1H3g16482 | 3:7,802,419-7,802,895 | - | C2H3g29477 | CX3g027459 | LOC_Os03g16030 | Os03g0267000 | OsMSR3, OsHsp18.0-CI | Detail |
| C1H3g06066 | 3:7,803,814-7,804,278 | + | C2H3g11139 | CX3g026761 | LOC_Os03g16020 | Os03g0266900 | OsHsp17.4 | Detail |
| C1H3g14734 | 3:7,807,699-7,808,172 | - | C2H3g11139 | CX3g027615 | LOC_Os03g16040 | Os03g0267200 | sHSP17.7, OSHSP17.7 | Detail |
| C1H3g06904 | 3:7,810,160-7,812,012 | - | C2H3g24515 | CX3g026398 | LOC_Os03g16050 | Os03g0267300 | - | Detail |
| C1H3g31620 | 3:7,820,863-7,823,953 | + | C2H3g00254 | CX3g030412 | LOC_Os03g16060 | Os03g0267500 | - | Detail |
| C1H3g27649 | 3:7,824,006-7,828,862 | - | C2H3g01773 | CX3g027859 | LOC_Os03g16070 | Os03g0267600 | - | Detail |
| C1H3g07562 | 3:7,836,440-7,840,919 | + | C2H3g22656 | CX3g024983 | LOC_Os03g16080 | Os03g0267700 | - | Detail |
| C1H3g17372 | 3:7,840,151-7,844,934 | - | C2H3g06739 | CX3g027806 | LOC_Os03g16090 | Os03g0267800 | HDR3 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055046 | 9:19,537,579-19,542,133 | - | C1H9g06523 | C2H9g06709 | LOC_Os09g38960 | Os09g0563200 | OsHAK18 | Detail |
| CX9g057500 | 9:19,546,906-19,551,859 | + | C1H9g19754 | C2H9g01538 | LOC_Os09g38970 | Os09g0563250 | - | Detail |
| CX9g054934 | 9:19,553,035-19,556,508 | + | C1H9g21219 | C2H9g16021 | LOC_Os09g38980 | Os09g0563300 | TCD9, OsCPn60alpha3, OsCPn60α3 | Detail |
| CX9g056918 | 9:19,566,866-19,569,751 | + | C1H9g01697 | C2H9g21433 | LOC_Os09g39020 | Os09g0563700 | - | Detail |
| CX9g057338 | 9:19,571,667-19,580,886 | - | C1H9g21274 | C2H9g26806 | LOC_Os09g39034 | Os09g0563800 | - | Detail |
| CX9g057061 | 9:19,573,431-19,574,024 | + | - | - | - | Os09g0563901 | - | Detail |
| CX9g057269 | 9:19,589,314-19,590,558 | - | C1H9g18913 | C2H9g05243 | LOC_Os09g39050 | Os09g0563950 | - | Detail |
| CX9g058103 | 9:19,631,433-19,634,360 | + | C1H9g06269 | C2H9g29707 | LOC_Os09g39160 | Os09g0565000 | - | Detail |
| CX9g055587 | 9:19,636,609-19,636,839 | + | - | - | - | - | - | Detail |
| CX9g055784 | 9:19,638,635-19,645,360 | - | C1H9g03665 | C2H9g17980 | LOC_Os09g39180 | Os09g0565200 | OsCRP1 | Detail |
| CX9g055878 | 9:19,647,664-19,652,960 | - | C1H9g23294 | C2H9g06735 | LOC_Os09g39190 | Os09g0565350 | - | Detail |
| CX9g056354 | 9:19,653,413-19,656,915 | - | C1H9g15519 | C2H9g29461 | LOC_Os09g39200 | Os09g0565400 | - | Detail |
| CX9g057714 | 9:19,658,969-19,675,899 | + | C1H9g26476 | C2H9g27919 | - | Os09g0565500 | - | Detail |
| CX9g057785 | 9:19,676,942-19,681,066 | + | C1H9g13374 | C2H9g07424 | LOC_Os09g39220 | Os09g0565600 | - | Detail |
| CX9g055093 | 9:19,682,901-19,684,106 | + | C1H9g26902 | C2H9g05946 | LOC_Os09g39230 | Os09g0565700 | - | Detail |
| CX9g057620 | 9:19,687,212-19,688,426 | + | C1H9g23958 | C2H9g19055 | LOC_Os09g39260 | Os09g0566050 | - | Detail |
| CX9g056260 | 9:19,690,320-19,695,576 | - | C1H9g25655 | C2H9g15395 | LOC_Os09g39270 | Os09g0566100 | - | Detail |
| CX9g056096 | 9:19,708,493-19,717,693 | - | C1H9g21987 | C2H9g09064 | LOC_Os09g39320 | Os09g0566550 | - | Detail |
| CX9g056849 | 9:19,727,863-19,731,483 | + | C1H9g04890 | C2H9g17992 | LOC_Os09g39380 | Os09g0567300 | MDHAR, OsMDHAR, OsMDAR3, OsMDHAR3 | Detail |
| CX9g058049 | 9:19,731,721-19,734,860 | + | C1H9g13266 | C2H9g25680 | LOC_Os09g39390 | Os09g0567366 | - | Detail |