| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g28900 | 6:5,697,135-5,698,193 | + | C1H6g15439 | CX6g044911 | LOC_Os06g12360 | Os06g0228950 | - | Detail |
| C2H6g05024 | 6:5,698,908-5,701,872 | - | C1H6g14481 | CX6g043477 | LOC_Os06g12370 | Os06g0229000 | - | Detail |
| C2H6g02329 | 6:5,710,871-5,716,601 | + | C1H6g30867 | CX6g043791 | LOC_Os06g12390 | Os06g0229200 | GalT | Detail |
| C2H6g13941 | 6:5,719,681-5,727,442 | + | C1H6g06761 | CX6g041469 | LOC_Os06g12400 | Os06g0229300 | - | Detail |
| C2H6g19443 | 6:5,728,867-5,730,473 | + | C1H6g31791 | CX6g045028 | LOC_Os06g12410 | Os06g0257600 | - | Detail |
| C2H6g15100 | 6:5,731,963-5,736,797 | + | C1H6g30269 | CX6g044435 | LOC_Os06g12450 | Os06g0229800 | ALK, alk, SSII-3, OsSSIIa, OsSSII-3, SSIIa, SSS2A, OsSSIIaChr6 | Detail |
| C2H6g02967 | 6:5,741,601-5,746,594 | + | C1H6g02539 | CX6g041722 | LOC_Os06g12460 | Os06g0230100 | OsCSLA3 | Detail |
| C2H6g18393 | 6:5,755,045-5,755,854 | + | C1H6g20958 | CX6g043899 | LOC_Os06g12500 | Os06g0231050 | CASP3, OsCASP3 | Detail |
| C2H6g07579 | 6:5,756,527-5,758,080 | - | C1H6g22566 | CX6g042564 | LOC_Os06g12510 | Os06g0231100 | - | Detail |
| C2H6g25430 | 6:5,760,221-5,762,376 | + | C1H6g10940 | CX6g042953 | LOC_Os06g12530 | Os06g0231300 | ROX3 | Detail |
| C2H6g00549 | 6:5,762,707-5,764,524 | - | C1H6g22566 | CX6g044108 | LOC_Os06g03570 | Os06g0231400 | - | Detail |
| C2H6g20507 | 6:5,770,817-5,773,183 | - | C1H6g09372 | CX6g042127 | LOC_Os06g12560 | Os06g0231600 | - | Detail |
| C2H6g04942 | 6:5,776,967-5,780,407 | - | C1H6g21654 | CX6g045497 | LOC_Os06g12580 | Os06g0232000 | - | Detail |
| C2H6g06021 | 6:5,784,696-5,794,631 | - | C1H6g16903 | CX6g044039 | LOC_Os06g12590 | Os06g0232100 | - | Detail |
| C2H6g20456 | 6:5,804,890-5,810,664 | + | C1H6g16972 | CX6g043544 | LOC_Os06g12600 | Os06g0232200 | OsFRK3 | Detail |
| C2H6g11066 | 6:5,828,992-5,832,397 | + | C1H6g17211 | CX6g041379 | LOC_Os06g12610 | Os06g0232300 | OsPIN1a | Detail |
| C2H6g00896 | 6:5,829,312-5,830,534 | - | - | - | - | Os06g0232350 | - | Detail |
| C2H6g26342 | 6:5,837,559-5,838,065 | - | C1H6g01622 | CX6g043622 | LOC_Os06g12620 | Os06g0232400 | - | Detail |
| C2H6g04539 | 6:5,851,234-5,854,132 | - | C1H6g13976 | CX6g045802 | LOC_Os06g12630 | Os06g0232600 | - | Detail |
| C2H6g12736 | 6:5,855,278-5,858,915 | + | C1H6g19729 | - | LOC_Os06g12640 | Os06g0232700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057546 | 9:19,409,778-19,410,080 | + | C1H9g31776 | C2H9g09986 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| CX9g054964 | 9:19,414,955-19,417,895 | + | C1H9g23848 | C2H9g10035 | LOC_Os09g38690 | Os09g0559800 | - | Detail |
| CX9g056386 | 9:19,418,579-19,423,258 | + | C1H9g29424 | C2H9g14153 | LOC_Os09g38700 | Os09g0559900 | - | Detail |
| CX9g056090 | 9:19,423,917-19,428,020 | - | C1H9g13760 | C2H9g30091 | LOC_Os09g38710 | Os09g0560000 | - | Detail |
| CX9g058051 | 9:19,430,385-19,433,960 | + | C1H9g27267 | C2H9g03510 | LOC_Os09g38720 | Os09g0560100 | - | Detail |
| CX9g056999 | 9:19,434,301-19,434,725 | - | C1H9g15569 | C2H9g12252 | - | Os09g0560150 | - | Detail |
| CX9g056836 | 9:19,435,332-19,436,282 | + | C1H9g04472 | - | LOC_Os09g38730 | Os09g0560200 | - | Detail |
| CX9g056539 | 9:19,438,225-19,438,647 | - | C1H9g20526 | C2H9g00285 | LOC_Os09g38740 | Os09g0560300 | - | Detail |
| CX9g056989 | 9:19,439,708-19,442,687 | - | C1H9g16516 | C2H9g11187 | LOC_Os09g38750 | Os09g0560400 | - | Detail |
| CX9g056436 | 9:19,442,984-19,445,947 | + | C1H9g03926 | C2H9g11268 | LOC_Os09g38755 | Os09g0560450 | - | Detail |
| CX9g057721 | 9:19,447,457-19,448,515 | + | C1H9g25922 | C2H9g20950 | LOC_Os09g38759 | Os09g0560500 | - | Detail |
| CX9g054913 | 9:19,449,216-19,451,451 | + | C1H9g27653 | C2H9g17838 | LOC_Os09g38768 | Os09g0560600 | - | Detail |
| CX9g055954 | 9:19,452,241-19,458,155 | + | C1H9g02125 | C2H9g22121 | LOC_Os09g38772 | Os09g0560700 | - | Detail |
| CX9g055464 | 9:19,458,906-19,460,775 | - | C1H9g04369 | C2H9g18757 | LOC_Os09g38784 | Os09g0560850 | - | Detail |
| CX9g056926 | 9:19,463,172-19,465,698 | - | C1H9g29491 | C2H9g18757 | LOC_Os09g38790 | Os09g0560900 | SIP1 | Detail |
| CX9g057672 | 9:19,466,876-19,467,058 | - | - | - | - | - | - | Detail |
| CX9g057033 | 9:19,513,319-19,515,202 | - | C1H9g18815 | C2H9g27162 | LOC_Os09g38920 | Os09g0564200 | - | Detail |
| CX9g057411 | 9:19,516,281-19,523,583 | - | C1H9g04134 | C2H9g03456 | LOC_Os09g38930 | Os09g0562750 | - | Detail |
| CX9g056924 | 9:19,529,220-19,529,393 | + | - | - | - | - | - | Detail |
| CX9g055362 | 9:19,534,726-19,535,500 | + | C1H9g07046 | C2H9g09986 | LOC_Os09g38670 | Os09g0559600 | - | Detail |