| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03816 | 1:24,817,159-24,833,117 | - | C1H1g22731 | CX1g004904 | LOC_Os01g48680 | Os01g0678500 | TPC1, OsTPC1, Tpc1, OsCC1 | Detail |
| C2H1g17432 | 1:24,834,344-24,836,347 | + | C1H1g06484 | CX1g001832 | LOC_Os01g48690 | Os01g0678600 | - | Detail |
| C2H1g29587 | 1:24,837,207-24,840,189 | - | C1H1g21202 | CX1g005378 | LOC_Os01g48700 | Os01g0678700 | - | Detail |
| C2H1g22453 | 1:24,843,096-24,846,556 | + | C1H1g29809 | CX1g000800 | - | - | - | Detail |
| C2H1g18621 | 1:24,848,468-24,849,100 | - | C1H1g09148 | CX1g006182 | LOC_Os01g48710 | Os01g0678800 | - | Detail |
| C2H1g02873 | 1:24,857,342-24,865,949 | + | C1H1g01369 | CX1g006519 | LOC_Os01g48720 | Os01g0679000 | - | Detail |
| C2H1g10975 | 1:24,874,515-24,879,080 | + | C1H1g09308 | CX1g004313 | LOC_Os01g48750 | Os01g0679550 | - | Detail |
| C2H1g25010 | 1:24,880,657-24,884,018 | + | C1H1g00895 | CX1g003619 | LOC_Os01g48760 | Os01g0679600 | - | Detail |
| C2H1g04367 | 1:24,884,811-24,887,061 | - | - | CX1g000487 | LOC_Os01g48770 | Os01g0679700 | - | Detail |
| C2H1g01242 | 1:24,898,075-24,904,856 | + | C1H1g15404 | CX1g003718 | LOC_Os01g48790 | Os01g0679900 | - | Detail |
| C2H1g04425 | 1:24,898,169-24,898,621 | - | - | - | - | Os01g0680000 | - | Detail |
| C2H1g18628 | 1:24,914,327-24,915,487 | + | C1H1g14743 | CX1g004327 | LOC_Os01g48800 | Os01g0680200 | OsPUP4, BG3/OsPUP4, BG3 | Detail |
| C2H1g11263 | 1:24,914,489-24,915,503 | - | - | - | - | Os01g0680100 | - | Detail |
| C2H1g09841 | 1:24,929,361-24,932,397 | + | C1H1g08166 | CX1g006918 | LOC_Os01g48810 | Os01g0680400 | - | Detail |
| C2H1g14175 | 1:24,937,054-24,937,968 | + | C1H1g07424 | CX1g002655 | LOC_Os01g48820 | Os01g0680600 | - | Detail |
| C2H1g22016 | 1:24,941,731-24,946,829 | - | C1H1g15834 | CX1g002522 | LOC_Os01g48830 | Os01g0680700 | - | Detail |
| C2H1g19155 | 1:24,955,834-24,959,326 | + | - | - | - | Os01g0680950 | - | Detail |
| C2H1g29263 | 1:24,956,786-24,959,385 | - | C1H1g17992 | CX1g007143 | LOC_Os01g48850 | Os01g0680900 | - | Detail |
| C2H1g05013 | 1:24,961,070-24,966,730 | - | C1H1g20689 | CX1g002388 | LOC_Os01g48874 | Os01g0681000 | - | Detail |
| C2H1g04783 | 1:24,969,619-24,970,164 | + | - | CX6g041804 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055644 | 9:19,257,907-19,260,025 | - | C1H9g28316 | C2H9g27079 | LOC_Os09g38510 | Os09g0557500 | - | Detail |
| CX9g055537 | 9:19,261,385-19,263,244 | - | C1H9g26334 | C2H9g25699 | LOC_Os09g38520 | Os09g0557700 | OsCYBDOMG1 | Detail |
| CX9g056733 | 9:19,268,437-19,271,981 | + | C1H9g29950 | C2H9g21071 | LOC_Os09g38530 | Os09g0557800 | - | Detail |
| CX9g056091 | 9:19,272,777-19,273,377 | + | C1H9g31843 | C2H9g22541 | LOC_Os09g38540 | Os09g0557900 | - | Detail |
| CX9g055672 | 9:19,273,938-19,277,673 | - | C1H9g10993 | C2H9g09128 | LOC_Os09g38550 | Os09g0558000 | - | Detail |
| CX9g055091 | 9:19,281,855-19,282,911 | + | C1H9g23233 | C2H9g29195 | LOC_Os09g38560 | Os09g0558100 | - | Detail |
| CX9g057634 | 9:19,290,525-19,291,550 | + | C1H9g06849 | C2H9g24336 | LOC_Os09g38570 | Os09g0558200 | - | Detail |
| CX9g057885 | 9:19,294,252-19,298,580 | + | C1H9g11940 | C2H9g29603 | LOC_Os09g38580 | Os09g0558300 | - | Detail |
| CX9g056034 | 9:19,307,318-19,307,785 | - | - | - | LOC_Os09g38610 | - | - | Detail |
| CX9g057540 | 9:19,311,489-19,316,859 | - | C1H9g12892 | C2H9g08101 | LOC_Os09g38620 | Os09g0558900 | - | Detail |
| CX9g056273 | 9:19,319,193-19,320,768 | - | C1H9g30051 | - | LOC_Os09g38630 | Os09g0559000 | - | Detail |
| CX9g055112 | 9:19,321,819-19,323,615 | - | C1H9g29805 | - | LOC_Os09g38640 | Os09g0559100 | - | Detail |
| CX9g057198 | 9:19,324,128-19,325,329 | - | C1H9g13819 | C2H9g14835 | LOC_Os09g38650 | Os09g0559200 | - | Detail |
| CX9g056691 | 9:19,331,888-19,332,325 | - | - | - | - | - | - | Detail |
| CX9g055045 | 9:19,345,802-19,346,044 | - | C1H9g31776 | C2H9g09986 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| CX9g055021 | 9:19,352,569-19,354,728 | - | C1H9g23376 | C2H9g03456 | LOC_Os09g38660 | Os09g0559500 | - | Detail |
| CX9g057039 | 9:19,363,324-19,365,537 | - | C1H9g00438 | C2H9g03456 | LOC_Os09g38660 | Os09g0559500 | - | Detail |
| CX9g058047 | 9:19,371,261-19,373,281 | + | C1H9g14616 | - | - | - | - | Detail |
| CX9g055967 | 9:19,386,098-19,386,694 | - | - | - | - | - | - | Detail |
| CX9g057059 | 9:19,404,402-19,405,538 | - | C1H9g23376 | C2H9g03456 | LOC_Os09g38660 | Os09g0559500 | - | Detail |