| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01677 | 3:1,883,766-1,887,423 | - | C1H3g00456 | CX3g025825 | LOC_Os03g04620 | Os03g0139500 | - | Detail |
| C2H3g16470 | 3:1,893,023-1,894,552 | + | C1H3g23782 | CX3g025500 | LOC_Os03g04630 | Os03g0139600 | - | Detail |
| C2H3g12777 | 3:1,933,825-1,935,351 | + | C1H3g00353 | CX3g025500 | LOC_Os03g04650 | Os03g0140100 | - | Detail |
| C2H3g27330 | 3:1,940,534-1,942,090 | + | C1H3g25985 | CX3g025500 | LOC_Os03g04660 | Os03g0140200 | CYP96B5, WSL5 | Detail |
| C2H3g29153 | 3:1,951,839-1,953,458 | + | C1H3g15064 | CX3g025500 | LOC_Os03g04680 | Os03g0140400 | SD37, OsCYP96B4, CYP96B4, CYP96B4/SD37, OsDSS1, DSS1 | Detail |
| C2H3g12329 | 3:1,955,457-1,958,399 | - | C1H3g07260 | CX3g029016 | LOC_Os03g16950 | Os03g0140500 | - | Detail |
| C2H3g13203 | 3:1,964,827-1,965,304 | - | C1H3g31769 | CX3g026380 | - | Os03g0140650 | - | Detail |
| C2H3g17473 | 3:1,987,231-1,988,894 | + | C1H3g10738 | CX3g028112 | LOC_Os03g04710 | Os03g0140700 | - | Detail |
| C2H3g05466 | 3:1,992,006-1,992,782 | + | - | - | - | - | - | Detail |
| C2H3g05277 | 3:1,993,925-1,996,800 | + | C1H3g01474 | CX3g029285 | LOC_Os03g04740 | Os03g0140900 | - | Detail |
| C2H3g19470 | 3:1,997,560-1,999,274 | + | C1H3g10114 | CX3g030261 | LOC_Os03g04750 | Os03g0141000 | - | Detail |
| C2H3g09892 | 3:2,001,052-2,004,476 | + | C1H3g00645 | CX3g026884 | LOC_Os03g04770 | Os03g0141200 | OsBMY4 | Detail |
| C2H3g00749 | 3:2,005,294-2,005,643 | - | C1H3g11403 | CX3g028262 | LOC_Os03g04780 | Os03g0286500 | - | Detail |
| C2H3g24267 | 3:2,008,300-2,011,820 | + | C1H3g11848 | CX3g024968 | LOC_Os03g04830 | Os03g0141700 | - | Detail |
| C2H3g24637 | 3:2,014,747-2,017,084 | + | C1H3g03155 | CX3g027335 | LOC_Os03g04840 | Os03g0141800 | - | Detail |
| C2H3g16825 | 3:2,025,016-2,028,837 | + | C1H3g16077 | CX3g027335 | LOC_Os03g04870 | Os03g0142200 | - | Detail |
| C2H3g26010 | 3:2,035,008-2,038,711 | + | C1H3g31558 | CX3g030528 | LOC_Os03g04890 | Os03g0142500 | - | Detail |
| C2H3g05143 | 3:2,039,567-2,040,522 | - | C1H3g10254 | CX3g030147 | LOC_Os03g04900 | Os03g0142600 | Os2R_MYB33 | Detail |
| C2H3g20094 | 3:2,061,134-2,067,861 | + | C1H3g19270 | CX3g030977 | LOC_Os03g04920 | Os03g0142800 | - | Detail |
| C2H3g26910 | 3:2,068,501-2,074,019 | - | C1H3g30404 | CX3g029043 | LOC_Os03g04930 | Os03g0142900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055725 | 9:19,079,879-19,080,487 | - | C1H9g27301 | C2H9g14838 | LOC_Os09g38110 | Os09g0554200 | - | Detail |
| CX9g057048 | 9:19,089,073-19,091,428 | + | C1H9g27672 | C2H9g06100 | LOC_Os09g38130 | Os09g0554300 | OsPILS7a | Detail |
| CX9g057828 | 9:19,097,966-19,104,785 | + | C1H9g05514 | C2H9g22067 | LOC_Os09g38239 | Os09g0555150 | - | Detail |
| CX9g057564 | 9:19,108,920-19,122,940 | + | C1H9g12988 | - | LOC_Os09g38268 | Os09g0555200 | OsNRPD1b, OsNRPD1 | Detail |
| CX9g057692 | 9:19,125,084-19,126,847 | + | C1H9g08888 | - | LOC_Os09g38300 | Os09g0555300 | - | Detail |
| CX9g056693 | 9:19,133,246-19,135,682 | - | C1H9g00138 | C2H9g08531 | LOC_Os09g38320 | Os09g0555500 | OsPSY3 | Detail |
| CX9g056039 | 9:19,140,068-19,148,151 | - | C1H9g26155 | C2H9g15848 | LOC_Os09g38330 | Os09g0555600 | - | Detail |
| CX9g055465 | 9:19,159,681-19,163,599 | + | C1H9g21016 | C2H11g00078 | LOC_Os11g41720 | - | - | Detail |
| CX9g056277 | 9:19,168,920-19,174,008 | - | C1H9g28461 | C2H9g23507 | LOC_Os09g38340 | Os09g0555700 | - | Detail |
| CX9g056374 | 9:19,189,057-19,191,075 | - | C1H9g19146 | C2H9g16440 | LOC_Os09g38350 | Os09g0555800 | OsCNL2 | Detail |
| CX9g056720 | 9:19,198,807-19,201,426 | - | C1H9g02315 | C2H9g26103 | LOC_Os09g38370 | Os09g0556000 | - | Detail |
| CX9g056177 | 9:19,205,203-19,207,529 | + | C1H9g14465 | C2H9g08303 | LOC_Os09g38390 | Os09g0556200 | - | Detail |
| CX9g056439 | 9:19,211,130-19,213,273 | + | C1H9g23531 | C2H9g24654 | LOC_Os09g38400 | - | - | Detail |
| CX9g057830 | 9:19,214,470-19,220,447 | - | C1H9g07170 | C2H9g15218 | LOC_Os09g38410 | Os09g0556400 | OsPHT4;5 | Detail |
| CX9g056846 | 9:19,221,871-19,227,194 | - | C1H9g24737 | C2H9g15403 | LOC_Os09g38420 | Os09g0556500 | - | Detail |
| CX9g057664 | 9:19,229,883-19,240,532 | + | C1H9g30681 | C2H9g02251 | LOC_Os09g38440 | Os09g0556700 | - | Detail |
| CX9g058159 | 9:19,240,965-19,242,985 | - | C1H9g19768 | C2H9g19914 | LOC_Os09g38450 | Os09g0556800 | - | Detail |
| CX9g054863 | 9:19,247,102-19,248,892 | + | C1H9g29064 | C2H9g21049 | LOC_Os09g38470 | Os09g0558600 | - | Detail |
| CX9g057682 | 9:19,251,185-19,253,310 | + | C1H9g16942 | C2H9g08319 | LOC_Os09g38490 | Os09g0558600 | - | Detail |
| CX9g057136 | 9:19,256,211-19,257,061 | - | C1H9g30179 | C2H9g11110 | LOC_Os09g38500 | Os09g0557400 | - | Detail |