| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g24395 | 3:1,748,487-1,751,400 | - | C1H3g19390 | CX3g026091 | LOC_Os03g04400 | Os03g0136800 | - | Detail |
| C2H3g13274 | 3:1,752,584-1,759,549 | - | C1H3g26141 | CX3g026194 | LOC_Os03g04410 | Os03g0136900 | - | Detail |
| C2H3g10382 | 3:1,774,938-1,778,363 | + | C1H3g09324 | CX3g025161 | LOC_Os03g04430 | Os03g0137200 | - | Detail |
| C2H3g08269 | 3:1,779,390-1,782,550 | - | C1H3g24578 | CX3g030835 | LOC_Os03g04440 | Os03g0137300 | - | Detail |
| C2H3g22036 | 3:1,784,994-1,792,534 | + | C1H3g23115 | CX3g030190 | LOC_Os03g04450 | Os03g0137400 | - | Detail |
| C2H3g01834 | 3:1,793,297-1,794,844 | + | C1H3g17292 | CX3g030394 | LOC_Os03g04470 | Os03g0137600 | - | Detail |
| C2H3g03162 | 3:1,796,082-1,797,807 | - | C1H3g01548 | CX3g026460 | LOC_Os03g04480 | Os03g0137700 | - | Detail |
| C2H3g00922 | 3:1,809,074-1,811,975 | + | C1H3g28742 | CX3g029178 | LOC_Os03g04490 | Os03g0137800 | KRP5 | Detail |
| C2H3g19333 | 3:1,818,927-1,823,375 | + | C1H3g12595 | CX3g025982 | LOC_Os03g04500 | Os03g0138000 | - | Detail |
| C2H3g17338 | 3:1,824,798-1,834,066 | - | C1H3g07979 | - | - | - | - | Detail |
| C2H3g18481 | 3:1,836,993-1,838,564 | + | C1H3g03175 | CX3g028238 | LOC_Os03g04530 | Os03g0138200 | - | Detail |
| C2H3g15460 | 3:1,841,396-1,841,668 | + | C1H3g14282 | CX3g028187 | LOC_Os03g04545 | Os03g0138400 | - | Detail |
| C2H3g21651 | 3:1,846,877-1,848,368 | + | C1H3g10085 | CX3g026784 | LOC_Os03g04550 | Os03g0138500 | - | Detail |
| C2H3g00575 | 3:1,849,047-1,852,634 | - | C1H3g00368 | CX3g030039 | LOC_Os03g04560 | Os03g0138600 | - | Detail |
| C2H3g22416 | 3:1,855,154-1,859,762 | - | C1H3g01644 | CX3g028744 | LOC_Os03g04570 | Os03g0138700 | OsPTR1 | Detail |
| C2H3g05285 | 3:1,863,560-1,864,601 | - | C1H3g10596 | CX3g025606 | LOC_Os03g13300 | Os03g0236200 | OsGAD3 | Detail |
| C2H3g08919 | 3:1,864,831-1,867,435 | + | C1H3g14228 | CX3g028323 | LOC_Os03g04580 | Os03g0138900 | - | Detail |
| C2H3g29903 | 3:1,867,900-1,870,644 | + | C1H3g13763 | CX3g027627 | LOC_Os03g04590 | Os03g0139100 | - | Detail |
| C2H3g28589 | 3:1,870,795-1,875,643 | - | C1H3g21758 | CX3g030974 | LOC_Os03g04600 | Os03g0139200 | - | Detail |
| C2H3g22571 | 3:1,881,356-1,882,120 | + | C1H3g05378 | CX3g025022 | LOC_Os03g04610 | Os03g0139400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057667 | 9:18,934,454-18,953,841 | - | C1H9g22027 | C2H9g10203 | LOC_Os09g37810 | Os09g0551251 | SDK11 | Detail |
| CX9g055805 | 9:18,959,589-18,964,613 | + | C1H9g23922 | C2H9g23601 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| CX9g055993 | 9:18,973,146-18,976,988 | + | C1H9g22027 | C2H9g18325 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| CX9g055121 | 9:18,978,689-18,982,119 | - | C1H9g23767 | C2H9g05665 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| CX9g055996 | 9:18,992,467-18,994,266 | + | C1H9g20157 | C2H9g09248 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| CX9g055169 | 9:18,996,007-19,003,574 | - | C1H9g09501 | C2H9g00765 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| CX9g057646 | 9:19,004,274-19,013,209 | - | C1H9g15933 | C2H9g18827 | LOC_Os09g37930 | Os09g0551900 | OsMLH3, FSV1 | Detail |
| CX9g054990 | 9:19,015,733-19,018,510 | - | C1H9g08089 | C2H9g26371 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| CX9g055948 | 9:19,021,544-19,022,973 | - | C1H9g25273 | C2H9g23182 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g056393 | 9:19,025,267-19,026,425 | - | C1H9g09840 | C2H9g28554 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g054872 | 9:19,030,059-19,032,327 | + | C1H9g15676 | C2H9g14226 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| CX9g057788 | 9:19,034,898-19,037,029 | + | C1H9g26813 | C2H9g12533 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| CX9g057780 | 9:19,039,349-19,039,660 | - | C1H9g21147 | C2H2g23208 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| CX9g055376 | 9:19,044,173-19,048,934 | + | C1H9g17635 | C2H9g10941 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| CX9g058064 | 9:19,050,067-19,052,812 | - | C1H9g26934 | C2H9g21953 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| CX9g057793 | 9:19,054,130-19,054,942 | + | - | - | - | - | - | Detail |
| CX9g056104 | 9:19,057,278-19,060,648 | + | C1H9g10869 | C2H9g19006 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| CX9g057943 | 9:19,067,533-19,069,359 | + | C1H9g00595 | C2H9g05592 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| CX9g057138 | 9:19,070,097-19,072,763 | + | C1H9g10302 | - | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| CX9g057604 | 9:19,074,279-19,076,239 | - | C1H9g31011 | C2H9g14746 | LOC_Os09g38100 | Os09g0554000 | - | Detail |