| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g24480 | 1:27,622,046-27,624,193 | + | C1H1g17968 | CX1g004845 | LOC_Os01g53900 | Os01g0742200 | - | Detail |
| C2H1g04401 | 1:27,639,382-27,643,061 | + | C1H1g30211 | CX1g007266 | LOC_Os01g53920 | Os01g0742400 | OsASLRK | Detail |
| C2H1g05690 | 1:27,643,047-27,647,327 | - | C1H1g16829 | CX1g000337 | LOC_Os01g53930 | Os01g0742500 | OsHXK6 | Detail |
| C2H1g15551 | 1:27,649,272-27,650,861 | - | C1H1g31036 | CX1g005919 | LOC_Os01g53940 | Os01g0742766 | - | Detail |
| C2H1g26459 | 1:27,664,808-27,666,678 | + | C1H1g12146 | CX1g007218 | LOC_Os01g53980 | Os01g0743100 | - | Detail |
| C2H1g30365 | 1:27,672,939-27,675,593 | - | C1H1g13979 | CX1g003238 | LOC_Os01g53990 | Os01g0743200 | - | Detail |
| C2H1g07295 | 1:27,682,679-27,687,336 | + | C1H1g20416 | CX1g000573 | LOC_Os01g54010 | Os01g0743300 | - | Detail |
| C2H1g18249 | 1:27,687,445-27,693,586 | - | C1H1g03969 | CX1g001592 | LOC_Os01g54020 | Os01g0743400 | - | Detail |
| C2H1g05014 | 1:27,693,725-27,698,369 | + | C1H1g00803 | CX1g003460 | LOC_Os01g54030 | Os01g0743500 | OscytME3 | Detail |
| C2H1g00803 | 1:27,698,897-27,703,219 | - | C1H1g06840 | CX1g004169 | LOC_Os01g54040 | Os01g0743600 | - | Detail |
| C2H1g15454 | 1:27,706,005-27,712,314 | + | C1H1g16391 | CX1g001390 | LOC_Os01g54050 | Os01g0743800 | - | Detail |
| C2H1g21661 | 1:27,716,012-27,723,513 | + | C1H1g28688 | CX1g003627 | LOC_Os01g54080 | Os01g0744000 | - | Detail |
| C2H1g24378 | 1:27,724,576-27,726,255 | + | C1H1g31382 | CX1g006644 | LOC_Os01g54090 | Os01g0744200 | - | Detail |
| C2H1g18426 | 1:27,727,521-27,732,459 | - | C1H1g10444 | CX1g000737 | LOC_Os01g54100 | Os01g0744300 | - | Detail |
| C2H1g05632 | 1:27,737,125-27,742,058 | + | C1H1g12791 | CX1g000340 | LOC_Os01g45620 | Os01g0643800 | - | Detail |
| C2H1g18422 | 1:27,744,090-27,751,083 | - | C1H1g08595 | CX1g000671 | LOC_Os01g54119 | Os01g0744400 | - | Detail |
| C2H1g03794 | 1:27,760,106-27,760,933 | - | C1H1g04241 | CX1g001906 | LOC_Os01g54170 | Os01g0745000 | - | Detail |
| C2H1g26869 | 1:27,769,110-27,770,779 | - | C1H1g05013 | CX1g000917 | LOC_Os01g54210 | Os01g0745700 | - | Detail |
| C2H1g26719 | 1:27,774,518-27,775,037 | - | C1H1g04265 | - | - | - | - | Detail |
| C2H1g01198 | 1:27,780,702-27,788,717 | + | C1H1g30379 | CX1g002726 | LOC_Os01g54240 | Os01g0746200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057667 | 9:18,934,454-18,953,841 | - | C1H9g22027 | C2H9g10203 | LOC_Os09g37810 | Os09g0551251 | SDK11 | Detail |
| CX9g055805 | 9:18,959,589-18,964,613 | + | C1H9g23922 | C2H9g23601 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| CX9g055993 | 9:18,973,146-18,976,988 | + | C1H9g22027 | C2H9g18325 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| CX9g055121 | 9:18,978,689-18,982,119 | - | C1H9g23767 | C2H9g05665 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| CX9g055996 | 9:18,992,467-18,994,266 | + | C1H9g20157 | C2H9g09248 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| CX9g055169 | 9:18,996,007-19,003,574 | - | C1H9g09501 | C2H9g00765 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| CX9g057646 | 9:19,004,274-19,013,209 | - | C1H9g15933 | C2H9g18827 | LOC_Os09g37930 | Os09g0551900 | OsMLH3, FSV1 | Detail |
| CX9g054990 | 9:19,015,733-19,018,510 | - | C1H9g08089 | C2H9g26371 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| CX9g055948 | 9:19,021,544-19,022,973 | - | C1H9g25273 | C2H9g23182 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g056393 | 9:19,025,267-19,026,425 | - | C1H9g09840 | C2H9g28554 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g054872 | 9:19,030,059-19,032,327 | + | C1H9g15676 | C2H9g14226 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| CX9g057788 | 9:19,034,898-19,037,029 | + | C1H9g26813 | C2H9g12533 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| CX9g057780 | 9:19,039,349-19,039,660 | - | C1H9g21147 | C2H2g23208 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| CX9g055376 | 9:19,044,173-19,048,934 | + | C1H9g17635 | C2H9g10941 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| CX9g058064 | 9:19,050,067-19,052,812 | - | C1H9g26934 | C2H9g21953 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| CX9g057793 | 9:19,054,130-19,054,942 | + | - | - | - | - | - | Detail |
| CX9g056104 | 9:19,057,278-19,060,648 | + | C1H9g10869 | C2H9g19006 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| CX9g057943 | 9:19,067,533-19,069,359 | + | C1H9g00595 | C2H9g05592 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| CX9g057138 | 9:19,070,097-19,072,763 | + | C1H9g10302 | - | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| CX9g057604 | 9:19,074,279-19,076,239 | - | C1H9g31011 | C2H9g14746 | LOC_Os09g38100 | Os09g0554000 | - | Detail |