| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g04976 | 5:20,737,275-20,738,300 | - | C1H5g01590 | CX5g037904 | LOC_Os05g42100 | Os05g0500400 | - | Detail |
| C2H5g17368 | 5:20,740,815-20,741,114 | - | C1H5g23905 | CX5g039175 | LOC_Os05g42110 | Os05g0500450 | - | Detail |
| C2H5g28908 | 5:20,741,605-20,743,018 | + | C1H5g08894 | CX5g040012 | LOC_Os05g42120 | Os05g0500500 | - | Detail |
| C2H5g15260 | 5:20,745,353-20,746,615 | + | C1H5g00178 | CX5g040288 | LOC_Os05g42130 | Os05g0500600 | - | Detail |
| C2H5g27415 | 5:20,747,139-20,747,840 | + | C1H5g22483 | CX5g039601 | LOC_Os05g42140 | Os05g0500700 | - | Detail |
| C2H5g14428 | 5:20,761,152-20,763,519 | - | C1H5g12028 | CX5g037712 | LOC_Os05g42150 | Os05g0500900 | GH3.4 | Detail |
| C2H5g30517 | 5:20,778,520-20,778,753 | + | C1H5g02940 | CX5g038629 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g05470 | 5:20,778,849-20,779,217 | + | C1H5g11642 | CX5g038629 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g20931 | 5:20,779,285-20,779,712 | + | C1H5g20540 | CX5g040758 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g14062 | 5:20,784,465-20,787,937 | - | C1H5g28555 | CX5g037320 | LOC_Os05g42190 | Os05g0501300 | - | Detail |
| C2H5g07451 | 5:20,789,735-20,795,475 | + | C1H5g24557 | CX5g040051 | LOC_Os05g42210 | Os05g0501400 | SDRLK-4 | Detail |
| C2H5g07655 | 5:20,799,494-20,802,527 | + | C1H5g06747 | CX5g041088 | LOC_Os05g42220 | Os05g0501600 | - | Detail |
| C2H5g05999 | 5:20,803,642-20,806,401 | + | C1H5g31272 | CX5g040415 | LOC_Os05g42230 | Os05g0501700 | - | Detail |
| C2H5g01142 | 5:20,809,394-20,810,657 | - | C1H5g16795 | CX5g039962 | LOC_Os05g42240 | Os05g0501800 | OsSPL | Detail |
| C2H5g13735 | 5:20,817,548-20,822,179 | + | C1H5g26421 | CX5g038769 | LOC_Os05g42250 | Os05g0502000 | OsCNGC16 | Detail |
| C2H5g18831 | 5:20,828,183-20,830,990 | + | C1H5g17054 | CX5g040519 | LOC_Os05g42270 | Os05g0502200 | - | Detail |
| C2H5g21255 | 5:20,833,484-20,837,130 | - | C1H5g06217 | CX5g040478 | LOC_Os05g42280 | Os05g0502500 | - | Detail |
| C2H5g19742 | 5:20,839,401-20,840,950 | + | C1H5g22762 | CX5g037515 | LOC_Os05g42290 | Os05g0502700 | - | Detail |
| C2H5g01889 | 5:20,843,911-20,847,454 | - | C1H5g20863 | CX5g039451 | LOC_Os05g42300 | Os05g0502800 | - | Detail |
| C2H5g24320 | 5:20,850,709-20,851,170 | + | C1H5g12553 | CX5g038016 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057667 | 9:18,934,454-18,953,841 | - | C1H9g22027 | C2H9g10203 | LOC_Os09g37810 | Os09g0551251 | SDK11 | Detail |
| CX9g055805 | 9:18,959,589-18,964,613 | + | C1H9g23922 | C2H9g23601 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| CX9g055993 | 9:18,973,146-18,976,988 | + | C1H9g22027 | C2H9g18325 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| CX9g055121 | 9:18,978,689-18,982,119 | - | C1H9g23767 | C2H9g05665 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| CX9g055996 | 9:18,992,467-18,994,266 | + | C1H9g20157 | C2H9g09248 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| CX9g055169 | 9:18,996,007-19,003,574 | - | C1H9g09501 | C2H9g00765 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| CX9g057646 | 9:19,004,274-19,013,209 | - | C1H9g15933 | C2H9g18827 | LOC_Os09g37930 | Os09g0551900 | OsMLH3, FSV1 | Detail |
| CX9g054990 | 9:19,015,733-19,018,510 | - | C1H9g08089 | C2H9g26371 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| CX9g055948 | 9:19,021,544-19,022,973 | - | C1H9g25273 | C2H9g23182 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g056393 | 9:19,025,267-19,026,425 | - | C1H9g09840 | C2H9g28554 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g054872 | 9:19,030,059-19,032,327 | + | C1H9g15676 | C2H9g14226 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| CX9g057788 | 9:19,034,898-19,037,029 | + | C1H9g26813 | C2H9g12533 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| CX9g057780 | 9:19,039,349-19,039,660 | - | C1H9g21147 | C2H2g23208 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| CX9g055376 | 9:19,044,173-19,048,934 | + | C1H9g17635 | C2H9g10941 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| CX9g058064 | 9:19,050,067-19,052,812 | - | C1H9g26934 | C2H9g21953 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| CX9g057793 | 9:19,054,130-19,054,942 | + | - | - | - | - | - | Detail |
| CX9g056104 | 9:19,057,278-19,060,648 | + | C1H9g10869 | C2H9g19006 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| CX9g057943 | 9:19,067,533-19,069,359 | + | C1H9g00595 | C2H9g05592 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| CX9g057138 | 9:19,070,097-19,072,763 | + | C1H9g10302 | - | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| CX9g057604 | 9:19,074,279-19,076,239 | - | C1H9g31011 | C2H9g14746 | LOC_Os09g38100 | Os09g0554000 | - | Detail |