| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g14999 | 5:11,541,642-11,543,247 | + | C2H5g28956 | CX5g037443 | LOC_Os05g24890 | Os05g0313600 | - | Detail |
| C1H5g14342 | 5:11,548,521-11,552,832 | - | C2H5g09680 | CX5g038966 | LOC_Os05g24930 | Os05g0313900 | - | Detail |
| C1H5g09849 | 5:11,557,608-11,561,561 | - | C2H5g06033 | CX5g040427 | LOC_Os05g24970 | Os05g0314100 | - | Detail |
| C1H5g22765 | 5:11,583,780-11,584,937 | - | C2H5g00810 | CX5g037543 | LOC_Os05g25040 | Os05g0314700 | - | Detail |
| C1H5g04259 | 5:11,608,983-11,610,457 | - | C2H5g02155 | CX5g037801 | LOC_Os05g25050 | - | - | Detail |
| C1H5g05529 | 5:11,612,088-11,620,333 | - | C2H5g30304 | CX5g041029 | LOC_Os05g25060 | Os05g0315100 | - | Detail |
| C1H5g09931 | 5:11,623,803-11,627,720 | + | C2H5g05402 | CX5g041131 | LOC_Os05g25070 | Os05g0315200 | - | Detail |
| C1H5g01965 | 5:11,673,669-11,679,007 | - | C2H5g12405 | CX5g038747 | LOC_Os05g25180 | Os05g0316000 | - | Detail |
| C1H5g07455 | 5:11,682,804-11,688,054 | - | C2H5g10475 | CX5g036801 | LOC_Os05g25194 | Os05g0316100 | OsZIP11 | Detail |
| C1H5g14829 | 5:11,693,705-11,699,158 | + | C2H5g10426 | CX5g040380 | LOC_Os05g25210 | Os05g0316200 | - | Detail |
| C1H5g07950 | 5:11,768,297-11,780,666 | + | C2H5g20825 | CX5g039716 | LOC_Os05g25310 | Os05g0317200 | - | Detail |
| C1H5g14900 | 5:11,840,492-11,844,985 | + | C2H5g23035 | CX5g039976 | LOC_Os05g25390 | Os05g0318100 | - | Detail |
| C1H5g13661 | 5:11,864,037-11,866,067 | + | - | - | LOC_Os05g25400 | Os05g0318300 | - | Detail |
| C1H5g12634 | 5:11,896,221-11,896,709 | - | - | CX5g039528 | - | - | - | Detail |
| C1H5g20321 | 5:11,927,898-11,929,069 | - | - | - | - | - | - | Detail |
| C1H5g17811 | 5:11,945,543-11,947,991 | + | C2H5g10029 | CX5g040187 | LOC_Os05g25480 | Os05g0319100 | - | Detail |
| C1H5g31568 | 5:11,949,683-11,951,610 | - | C2H5g02981 | CX5g037138 | LOC_Os05g25490 | Os05g0319200 | - | Detail |
| C1H5g24106 | 5:11,952,039-11,953,256 | - | C2H5g07167 | CX5g037138 | LOC_Os05g25490 | Os05g0319200 | - | Detail |
| C1H5g04131 | 5:11,966,295-11,969,890 | + | C2H5g12461 | CX5g039469 | LOC_Os05g25540 | Os05g0319700 | - | Detail |
| C1H5g06844 | 5:11,976,244-11,980,654 | - | C2H5g02040 | CX5g039975 | LOC_Os05g25550 | Os05g0319800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057667 | 9:18,934,454-18,953,841 | - | C1H9g22027 | C2H9g10203 | LOC_Os09g37810 | Os09g0551251 | SDK11 | Detail |
| CX9g055805 | 9:18,959,589-18,964,613 | + | C1H9g23922 | C2H9g23601 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| CX9g055993 | 9:18,973,146-18,976,988 | + | C1H9g22027 | C2H9g18325 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| CX9g055121 | 9:18,978,689-18,982,119 | - | C1H9g23767 | C2H9g05665 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| CX9g055996 | 9:18,992,467-18,994,266 | + | C1H9g20157 | C2H9g09248 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| CX9g055169 | 9:18,996,007-19,003,574 | - | C1H9g09501 | C2H9g00765 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| CX9g057646 | 9:19,004,274-19,013,209 | - | C1H9g15933 | C2H9g18827 | LOC_Os09g37930 | Os09g0551900 | OsMLH3, FSV1 | Detail |
| CX9g054990 | 9:19,015,733-19,018,510 | - | C1H9g08089 | C2H9g26371 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| CX9g055948 | 9:19,021,544-19,022,973 | - | C1H9g25273 | C2H9g23182 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g056393 | 9:19,025,267-19,026,425 | - | C1H9g09840 | C2H9g28554 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| CX9g054872 | 9:19,030,059-19,032,327 | + | C1H9g15676 | C2H9g14226 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| CX9g057788 | 9:19,034,898-19,037,029 | + | C1H9g26813 | C2H9g12533 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| CX9g057780 | 9:19,039,349-19,039,660 | - | C1H9g21147 | C2H2g23208 | LOC_Os09g38020 | Os09g0553100 | - | Detail |
| CX9g055376 | 9:19,044,173-19,048,934 | + | C1H9g17635 | C2H9g10941 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| CX9g058064 | 9:19,050,067-19,052,812 | - | C1H9g26934 | C2H9g21953 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| CX9g057793 | 9:19,054,130-19,054,942 | + | - | - | - | - | - | Detail |
| CX9g056104 | 9:19,057,278-19,060,648 | + | C1H9g10869 | C2H9g19006 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| CX9g057943 | 9:19,067,533-19,069,359 | + | C1H9g00595 | C2H9g05592 | LOC_Os09g38080 | Os09g0553800 | - | Detail |
| CX9g057138 | 9:19,070,097-19,072,763 | + | C1H9g10302 | - | LOC_Os09g38090 | Os09g0553900 | - | Detail |
| CX9g057604 | 9:19,074,279-19,076,239 | - | C1H9g31011 | C2H9g14746 | LOC_Os09g38100 | Os09g0554000 | - | Detail |