| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23511 | 1:19,802,539-19,808,054 | + | C1H1g22058 | CX1g001079 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C2H1g23392 | 1:19,864,831-19,868,195 | + | C1H1g30169 | CX1g004267 | LOC_Os01g39580 | Os01g0577300 | PSH1, Rb2 | Detail |
| C2H1g00498 | 1:19,879,386-19,882,883 | - | C1H1g25385 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C2H1g08618 | 1:19,897,489-19,898,531 | - | C1H1g03498 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C2H1g04424 | 1:19,899,125-19,902,478 | - | C1H1g03498 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C2H1g11258 | 1:19,906,084-19,909,922 | - | C1H1g20612 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C2H1g04472 | 1:19,912,609-19,914,349 | + | C1H1g26503 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C2H1g18851 | 1:19,916,240-19,918,008 | + | C1H1g02081 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C2H1g09591 | 1:19,965,452-19,968,345 | + | C1H1g21250 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C2H1g01010 | 1:19,973,667-19,975,999 | + | C1H1g07602 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C2H1g23706 | 1:19,976,922-19,980,018 | - | C1H1g16386 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C2H1g07845 | 1:19,980,871-19,982,006 | + | C1H1g01467 | CX1g003139 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C2H1g09319 | 1:19,984,976-19,988,136 | - | C1H1g21549 | CX1g000391 | LOC_Os01g39800 | Os01g0580000 | - | Detail |
| C2H1g11799 | 1:19,989,590-19,995,302 | + | C1H1g25713 | CX1g006764 | LOC_Os01g39810 | Os01g0580100 | - | Detail |
| C2H1g14347 | 1:20,009,000-20,015,009 | + | C1H1g21126 | CX1g007091 | LOC_Os01g39830 | Os01g0580200 | - | Detail |
| C2H1g28048 | 1:20,014,913-20,016,892 | - | - | CX1g004854 | LOC_Os01g39840 | Os01g0580300 | - | Detail |
| C2H1g10202 | 1:20,037,484-20,038,729 | + | C1H1g08752 | CX1g001278 | LOC_Os01g39860 | Os01g0580500 | ACO7, OsACO7 | Detail |
| C2H1g22352 | 1:20,045,704-20,051,087 | - | C1H1g22394 | CX1g003562 | LOC_Os01g39890 | Os01g0580800 | - | Detail |
| C2H1g01027 | 1:20,070,536-20,074,539 | + | C1H1g15496 | CX1g003223 | LOC_Os01g39960 | Os01g0581300 | OsLCYe | Detail |
| C2H1g16645 | 1:20,075,082-20,077,784 | + | C1H1g29026 | CX1g001920 | LOC_Os01g39970 | Os01g0581400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057441 | 9:18,754,407-18,757,014 | - | C1H9g03915 | C2H9g26899 | LOC_Os09g37510 | Os09g0547200 | - | Detail |
| CX9g057908 | 9:18,757,860-18,758,443 | + | C1H9g24811 | C2H9g14355 | LOC_Os09g37610 | Os09g0548300 | - | Detail |
| CX9g056795 | 9:18,778,335-18,782,920 | + | C1H9g15355 | C2H9g03178 | LOC_Os09g37520 | Os09g0547300 | - | Detail |
| CX9g054942 | 9:18,795,708-18,797,332 | + | C1H9g27743 | C2H9g17799 | LOC_Os09g37540 | Os09g0547500 | LOGL9 | Detail |
| CX9g055014 | 9:18,803,635-18,815,990 | + | C1H9g22751 | C2H9g03194 | LOC_Os09g37580 | Os09g0547800 | - | Detail |
| CX9g058170 | 9:18,822,269-18,825,957 | + | C1H9g12329 | C2H9g22088 | LOC_Os09g37590 | Os09g0548100 | - | Detail |
| CX9g056357 | 9:18,829,760-18,832,240 | + | C1H9g18410 | C2H9g30052 | LOC_Os09g37600 | Os09g0548200 | - | Detail |
| CX9g055652 | 9:18,833,278-18,837,243 | + | C1H9g24811 | C2H9g14355 | LOC_Os09g37610 | Os09g0548300 | - | Detail |
| CX9g055960 | 9:18,843,936-18,845,000 | + | C1H9g18904 | C2H9g27079 | LOC_Os09g37640 | Os09g0548600 | - | Detail |
| CX9g055964 | 9:18,845,479-18,848,185 | - | C1H9g05052 | C2H9g10997 | LOC_Os09g37650 | Os09g0548700 | - | Detail |
| CX9g058080 | 9:18,868,023-18,869,874 | - | C1H9g02279 | C2H9g30567 | LOC_Os09g37690 | Os09g0549300 | - | Detail |
| CX9g055037 | 9:18,873,216-18,874,810 | + | C1H9g28309 | C2H9g13697 | LOC_Os09g37700 | Os09g0549400 | - | Detail |
| CX9g055826 | 9:18,879,787-18,883,811 | + | C1H9g00407 | C2H9g27020 | LOC_Os09g37710 | Os09g0549450 | OsNLP4 | Detail |
| CX9g057808 | 9:18,886,504-18,887,283 | - | C1H9g10891 | C2H9g00777 | LOC_Os09g37720 | Os09g0549500 | - | Detail |
| CX9g055520 | 9:18,888,207-18,889,293 | + | C1H9g05700 | C2H9g07668 | LOC_Os09g37730 | Os09g0549600 | - | Detail |
| CX9g057767 | 9:18,889,584-18,889,952 | - | C1H9g13469 | C2H9g00404 | LOC_Os09g37740 | Os09g0549700 | - | Detail |
| CX9g055225 | 9:18,891,294-18,891,581 | + | - | - | - | - | - | Detail |
| CX9g055069 | 9:18,892,591-18,893,121 | - | - | - | - | - | - | Detail |
| CX9g057689 | 9:18,894,487-18,894,657 | + | - | - | - | Os01g0307624 | - | Detail |
| CX9g057557 | 9:18,901,681-18,906,854 | - | C1H9g12992 | C2H9g30039 | LOC_Os09g37760 | Os09g0550000 | - | Detail |