| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29368 | 4:30,507,658-30,513,591 | + | C1H4g17177 | CX4g034793 | LOC_Os04g59320 | Os04g0689400 | - | Detail |
| C2H4g10646 | 4:30,514,406-30,515,925 | + | C1H4g15962 | CX4g031663 | LOC_Os04g59330 | Os04g0689500 | - | Detail |
| C2H4g21499 | 4:30,520,045-30,521,017 | + | C1H4g05384 | CX4g036307 | LOC_Os04g59340 | Os04g0689700 | - | Detail |
| C2H4g01472 | 4:30,523,602-30,524,699 | + | C1H4g05536 | CX4g034950 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C2H4g12610 | 4:30,526,563-30,530,889 | + | C1H4g14916 | CX4g032101 | LOC_Os04g59360 | Os04g0689800 | - | Detail |
| C2H4g18186 | 4:30,541,288-30,542,675 | + | C1H4g15741 | CX4g031741 | LOC_Os04g59370 | Os04g0689900 | - | Detail |
| C2H4g13638 | 4:30,551,643-30,554,062 | + | C1H4g21540 | CX4g034943 | LOC_Os04g59380 | Os04g0690100 | - | Detail |
| C2H4g23794 | 4:30,561,339-30,567,049 | + | C1H4g10285 | CX4g032712 | LOC_Os04g59394 | Os04g0690300 | - | Detail |
| C2H4g10236 | 4:30,568,757-30,572,207 | + | C1H4g14673 | CX4g035891 | LOC_Os04g59400 | Os04g0690400 | - | Detail |
| C2H4g10344 | 4:30,578,674-30,579,488 | + | C1H4g07117 | CX4g034143 | LOC_Os04g59420 | Os04g0690500 | - | Detail |
| C2H4g01830 | 4:30,580,591-30,584,096 | - | C1H4g16012 | CX4g032346 | LOC_Os04g59430 | Os04g0690600 | - | Detail |
| C2H4g21324 | 4:30,589,590-30,590,357 | + | - | - | LOC_Os04g59440 | Os04g0690800 | PSBS2, PsbS, OsPsbS2, PSII-S | Detail |
| C2H4g11677 | 4:30,594,897-30,596,851 | + | C1H4g05861 | CX4g034110 | LOC_Os04g59450 | Os04g0691100 | SAPK5, OsSAPK5 | Detail |
| C2H4g24101 | 4:30,597,364-30,606,211 | - | C1H4g07779 | CX4g036214 | LOC_Os04g59460 | Os04g0691200 | - | Detail |
| C2H4g14210 | 4:30,611,359-30,612,219 | - | C1H4g13585 | CX4g036345 | LOC_Os04g59470 | Os04g0691300 | - | Detail |
| C2H4g07706 | 4:30,613,775-30,616,115 | + | C1H4g12409 | CX4g035525 | LOC_Os04g59480 | Os04g0691400 | - | Detail |
| C2H4g03071 | 4:30,621,244-30,633,385 | + | C1H4g07625 | CX4g032924 | LOC_Os04g59494 | Os04g0691500 | - | Detail |
| C2H4g15610 | 4:30,633,797-30,634,228 | + | C1H4g01268 | - | - | Os04g0691600 | - | Detail |
| C2H4g09678 | 4:30,636,339-30,645,952 | - | C1H4g29823 | CX4g035435 | LOC_Os04g59510 | Os04g0691700 | - | Detail |
| C2H4g25533 | 4:30,645,582-30,645,842 | + | C1H4g24974 | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001474 | 1:30,819,642-30,821,695 | - | C1H1g22292 | C2H1g06177 | LOC_Os01g59910 | Os01g0814700 | - | Detail |
| CX1g002402 | 1:30,823,119-30,826,267 | - | C1H1g15127 | C2H1g04713 | LOC_Os01g59920 | Os01g0814800 | GRA78 | Detail |
| CX1g004755 | 1:30,827,370-30,830,283 | - | C1H1g12031 | C2H1g29671 | LOC_Os01g59930 | Os01g0814900 | - | Detail |
| CX1g003647 | 1:30,837,192-30,838,650 | - | - | - | - | Os01g0815100 | - | Detail |
| CX1g002474 | 1:30,842,202-30,842,363 | + | - | - | LOC_Os11g12240 | Os11g0476333 | - | Detail |
| CX1g000143 | 1:30,856,598-30,860,724 | + | C1H1g20676 | C2H1g07239 | LOC_Os01g59980 | Os01g0815700 | - | Detail |
| CX1g004658 | 1:30,862,841-30,864,289 | + | C1H1g31003 | C2H1g17151 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| CX1g001519 | 1:30,865,273-30,868,879 | - | C1H1g02777 | C2H1g11561 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| CX1g001573 | 1:30,869,271-30,870,839 | + | C1H1g09791 | C2H1g13748 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| CX1g005248 | 1:30,872,438-30,873,597 | - | C1H1g00772 | C2H1g09624 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| CX1g005963 | 1:30,880,114-30,880,266 | - | - | - | - | Os01g0693532 | - | Detail |
| CX1g002744 | 1:30,885,996-30,902,049 | - | C1H1g15712 | C2H1g09286 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| CX1g001742 | 1:30,917,502-30,922,556 | + | C1H1g04794 | C2H1g04146 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| CX1g006929 | 1:30,925,704-30,927,565 | + | C1H1g24879 | C2H1g25178 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| CX1g001408 | 1:30,932,844-30,935,692 | - | C1H1g23182 | C2H1g12383 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| CX1g001908 | 1:30,938,815-30,941,681 | - | C1H1g20937 | C2H1g27536 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| CX1g005873 | 1:30,946,896-30,949,767 | + | C1H1g16273 | C2H1g05301 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| CX1g006550 | 1:30,950,494-30,950,790 | + | C1H1g27130 | - | - | - | - | Detail |
| CX1g004355 | 1:30,950,931-30,951,863 | - | C1H1g15906 | C2H1g04044 | - | - | - | Detail |
| CX1g005295 | 1:30,957,201-30,957,437 | + | - | - | - | Os01g0728000 | - | Detail |