| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g05524 | 4:24,217,402-24,220,620 | + | C1H4g01520 | CX4g036555 | LOC_Os04g47320 | Os04g0561000 | - | Detail |
| C2H4g24329 | 4:24,222,470-24,223,252 | - | C1H4g11046 | CX4g033871 | LOC_Os04g47330 | Os04g0561200 | OsROP | Detail |
| C2H4g08693 | 4:24,228,874-24,231,959 | + | C1H4g17483 | CX4g034561 | LOC_Os04g47360 | Os04g0561500 | - | Detail |
| C2H4g04530 | 4:24,233,807-24,235,386 | + | C1H4g22676 | CX4g034510 | LOC_Os04g47370 | Os04g0561600 | - | Detail |
| C2H4g06692 | 4:24,237,015-24,241,597 | - | C1H4g16662 | CX4g035518 | LOC_Os04g47380 | Os04g0561700 | - | Detail |
| C2H4g02963 | 4:24,242,832-24,244,297 | - | C1H4g25205 | CX4g033152 | LOC_Os04g47390 | Os04g0561800 | - | Detail |
| C2H4g29534 | 4:24,247,284-24,250,341 | - | C1H4g17277 | CX4g032801 | LOC_Os04g47400 | Os04g0561900 | - | Detail |
| C2H4g11725 | 4:24,251,322-24,257,953 | + | C1H4g25981 | CX4g034619 | LOC_Os04g47410 | Os04g0562000 | - | Detail |
| C2H4g01488 | 4:24,259,422-24,261,365 | - | C1H4g01383 | CX4g033511 | LOC_Os04g47420 | Os04g0562100 | OsLHT5 | Detail |
| C2H4g15916 | 4:24,275,781-24,276,836 | + | C1H4g04777 | - | LOC_Os04g47450 | Os04g0562500 | - | Detail |
| C2H4g02352 | 4:24,288,214-24,292,771 | + | C1H4g07137 | CX4g032344 | LOC_Os04g47480 | Os04g0562800 | - | Detail |
| C2H4g30154 | 4:24,294,473-24,298,677 | - | C1H4g14768 | CX4g031395 | LOC_Os04g47520 | Os04g0563000 | - | Detail |
| C2H4g13189 | 4:24,305,351-24,309,231 | - | C1H4g27503 | CX4g034508 | LOC_Os04g47530 | Os04g0563100 | - | Detail |
| C2H4g09598 | 4:24,309,363-24,311,585 | + | C1H4g12075 | CX4g032577 | LOC_Os04g47550 | Os04g0563300 | - | Detail |
| C2H4g06274 | 4:24,315,809-24,318,234 | - | C1H4g30163 | CX4g036609 | LOC_Os04g47580 | Os04g0563700 | - | Detail |
| C2H4g20502 | 4:24,320,764-24,337,425 | - | C1H4g25027 | CX4g036534 | LOC_Os04g47590 | Os04g0563801 | - | Detail |
| C2H4g03895 | 4:24,351,829-24,355,202 | - | C1H4g07757 | CX4g036655 | LOC_Os04g47620 | Os04g0563900 | - | Detail |
| C2H4g00625 | 4:24,359,497-24,361,668 | - | C1H4g23508 | CX4g036311 | LOC_Os04g47640 | Os04g0564000 | - | Detail |
| C2H4g08419 | 4:24,364,901-24,366,691 | + | C1H4g06710 | CX4g031734 | LOC_Os04g47680 | Os04g0564500 | - | Detail |
| C2H4g16306 | 4:24,367,704-24,369,981 | + | C1H4g12463 | CX4g034730 | LOC_Os04g47690 | Os04g0564600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055394 | 9:18,297,011-18,298,707 | + | C1H9g00250 | - | LOC_Os09g36630 | Os09g0537200 | - | Detail |
| CX9g057733 | 9:18,299,510-18,301,524 | + | C1H9g06888 | C2H9g02330 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| CX9g057665 | 9:18,320,720-18,322,711 | + | C1H9g06888 | C2H9g02330 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| CX9g057345 | 9:18,325,017-18,326,730 | - | C1H9g14336 | C2H9g11788 | LOC_Os09g36680 | Os09g0537700 | RNS4, OsRNS4, OsRRP, RNaseDIS | Detail |
| CX9g056094 | 9:18,330,415-18,330,639 | + | C1H2g02834 | C2H2g08160 | LOC_Os09g36690 | Os03g0695400 | - | Detail |
| CX9g055095 | 9:18,333,714-18,335,697 | - | C1H9g12593 | C2H9g24881 | LOC_Os09g36700 | Os09g0538000 | - | Detail |
| CX9g057133 | 9:18,338,511-18,340,680 | + | C1H9g12194 | C2H9g25356 | LOC_Os09g36710 | Os09g0538200 | - | Detail |
| CX9g057020 | 9:18,350,569-18,350,781 | + | - | - | - | - | - | Detail |
| CX9g055070 | 9:18,352,012-18,352,179 | + | - | - | - | - | - | Detail |
| CX9g055094 | 9:18,354,651-18,354,920 | + | C1H9g18306 | C2H9g08473 | LOC_Os09g32790 | - | - | Detail |
| CX9g055320 | 9:18,366,621-18,370,559 | + | C1H9g10922 | C2H9g18367 | LOC_Os09g32780 | - | - | Detail |
| CX9g055420 | 9:18,372,811-18,373,722 | - | C1H9g31173 | C2H9g08114 | LOC_Os09g36730 | Os09g0538400 | OsMYB108 | Detail |
| CX9g056101 | 9:18,380,141-18,380,566 | - | C1H9g22212 | C2H9g01669 | LOC_Os09g36735 | Os09g0538450 | - | Detail |
| CX9g057786 | 9:18,380,949-18,382,831 | + | C1H9g15664 | C2H9g03742 | LOC_Os09g36740 | Os09g0538500 | MS5 | Detail |
| CX9g056628 | 9:18,383,316-18,387,365 | - | C1H9g23441 | C2H9g08362 | LOC_Os09g36750 | Os09g0538600 | APX9 | Detail |
| CX9g055639 | 9:18,391,065-18,394,984 | + | C1H9g29591 | C2H9g27815 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| CX9g055160 | 9:18,395,725-18,399,369 | - | C1H9g06893 | C2H9g20614 | LOC_Os09g36770 | Os09g0538800 | - | Detail |
| CX9g055568 | 9:18,405,325-18,405,891 | + | C1H9g05351 | - | LOC_Os09g36790 | Os09g0539000 | - | Detail |
| CX9g056861 | 9:18,406,664-18,409,723 | - | C1H9g17651 | C2H9g01552 | LOC_Os09g36800 | Os09g0539100 | - | Detail |
| CX9g056453 | 9:18,411,497-18,416,813 | + | C1H9g23415 | C2H9g21684 | LOC_Os09g36810 | Os09g0539200 | - | Detail |