| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g06127 | 3:32,303,571-32,307,779 | + | C1H3g24850 | CX3g027527 | LOC_Os03g62610 | Os03g0843200 | - | Detail |
| C2H3g01988 | 3:32,308,000-32,310,432 | - | C1H3g01007 | CX3g028344 | LOC_Os03g62620 | Os03g0843300 | - | Detail |
| C2H3g11755 | 3:32,310,721-32,312,657 | + | C1H3g21046 | CX3g025686 | LOC_Os03g62630 | Os03g0843400 | - | Detail |
| C2H3g01237 | 3:32,312,684-32,318,650 | - | C1H3g08743 | CX3g027867 | LOC_Os03g62640 | Os03g0843500 | - | Detail |
| C2H3g27702 | 3:32,319,596-32,327,026 | + | C1H3g28947 | CX3g030484 | LOC_Os03g62650 | Os03g0843600 | Os-CASTOR | Detail |
| C2H3g20877 | 3:32,328,441-32,332,474 | + | C1H3g22971 | CX3g029476 | LOC_Os03g62660 | Os03g0843700 | - | Detail |
| C2H3g21220 | 3:32,333,202-32,335,124 | + | C1H3g08128 | CX3g026603 | LOC_Os03g62670 | Os03g0843800 | OsHOL1 | Detail |
| C2H3g22425 | 3:32,335,748-32,339,201 | - | C1H3g30449 | CX3g027789 | LOC_Os03g62680 | Os03g0843900 | - | Detail |
| C2H3g21394 | 3:32,339,558-32,341,447 | + | C1H3g17557 | CX3g027520 | LOC_Os03g62690 | Os03g0844000 | - | Detail |
| C2H3g22805 | 3:32,345,973-32,351,479 | - | C1H3g24479 | CX3g026619 | LOC_Os03g62700 | Os03g0844100 | - | Detail |
| C2H3g19054 | 3:32,353,748-32,357,223 | + | C1H3g13171 | CX3g029702 | LOC_Os03g62720 | Os03g0844450 | - | Detail |
| C2H3g29284 | 3:32,358,635-32,363,299 | + | C1H3g03440 | CX3g030518 | LOC_Os03g62730 | Os03g0844500 | - | Detail |
| C2H3g07021 | 3:32,363,365-32,366,530 | - | C1H3g17919 | CX3g026392 | LOC_Os03g62740 | Os03g0844600 | - | Detail |
| C2H3g14850 | 3:32,370,593-32,376,702 | + | C1H3g09189 | CX3g027621 | LOC_Os03g62750 | Os03g0844700 | - | Detail |
| C2H3g09934 | 3:32,380,276-32,383,178 | - | C1H3g04796 | CX3g027114 | LOC_Os03g62780 | Os03g0844900 | - | Detail |
| C2H3g04637 | 3:32,383,797-32,385,237 | - | C1H3g08823 | CX3g027041 | LOC_Os03g62790 | Os03g0845000 | - | Detail |
| C2H3g26108 | 3:32,386,554-32,389,563 | - | C1H3g29234 | CX3g030975 | LOC_Os03g62830 | Os03g0845300 | - | Detail |
| C2H3g24255 | 3:32,390,402-32,390,950 | + | C1H3g31847 | CX3g025947 | LOC_Os03g62840 | - | - | Detail |
| C2H3g26469 | 3:32,391,795-32,400,675 | - | C1H3g01054 | CX3g027086 | LOC_Os03g62850 | Os03g0845500 | - | Detail |
| C2H3g09183 | 3:32,401,489-32,403,759 | - | C1H3g13526 | CX3g030387 | LOC_Os03g62860 | Os03g0845600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055394 | 9:18,297,011-18,298,707 | + | C1H9g00250 | - | LOC_Os09g36630 | Os09g0537200 | - | Detail |
| CX9g057733 | 9:18,299,510-18,301,524 | + | C1H9g06888 | C2H9g02330 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| CX9g057665 | 9:18,320,720-18,322,711 | + | C1H9g06888 | C2H9g02330 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| CX9g057345 | 9:18,325,017-18,326,730 | - | C1H9g14336 | C2H9g11788 | LOC_Os09g36680 | Os09g0537700 | RNS4, OsRNS4, OsRRP, RNaseDIS | Detail |
| CX9g056094 | 9:18,330,415-18,330,639 | + | C1H2g02834 | C2H2g08160 | LOC_Os09g36690 | Os03g0695400 | - | Detail |
| CX9g055095 | 9:18,333,714-18,335,697 | - | C1H9g12593 | C2H9g24881 | LOC_Os09g36700 | Os09g0538000 | - | Detail |
| CX9g057133 | 9:18,338,511-18,340,680 | + | C1H9g12194 | C2H9g25356 | LOC_Os09g36710 | Os09g0538200 | - | Detail |
| CX9g057020 | 9:18,350,569-18,350,781 | + | - | - | - | - | - | Detail |
| CX9g055070 | 9:18,352,012-18,352,179 | + | - | - | - | - | - | Detail |
| CX9g055094 | 9:18,354,651-18,354,920 | + | C1H9g18306 | C2H9g08473 | LOC_Os09g32790 | - | - | Detail |
| CX9g055320 | 9:18,366,621-18,370,559 | + | C1H9g10922 | C2H9g18367 | LOC_Os09g32780 | - | - | Detail |
| CX9g055420 | 9:18,372,811-18,373,722 | - | C1H9g31173 | C2H9g08114 | LOC_Os09g36730 | Os09g0538400 | OsMYB108 | Detail |
| CX9g056101 | 9:18,380,141-18,380,566 | - | C1H9g22212 | C2H9g01669 | LOC_Os09g36735 | Os09g0538450 | - | Detail |
| CX9g057786 | 9:18,380,949-18,382,831 | + | C1H9g15664 | C2H9g03742 | LOC_Os09g36740 | Os09g0538500 | MS5 | Detail |
| CX9g056628 | 9:18,383,316-18,387,365 | - | C1H9g23441 | C2H9g08362 | LOC_Os09g36750 | Os09g0538600 | APX9 | Detail |
| CX9g055639 | 9:18,391,065-18,394,984 | + | C1H9g29591 | C2H9g27815 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| CX9g055160 | 9:18,395,725-18,399,369 | - | C1H9g06893 | C2H9g20614 | LOC_Os09g36770 | Os09g0538800 | - | Detail |
| CX9g055568 | 9:18,405,325-18,405,891 | + | C1H9g05351 | - | LOC_Os09g36790 | Os09g0539000 | - | Detail |
| CX9g056861 | 9:18,406,664-18,409,723 | - | C1H9g17651 | C2H9g01552 | LOC_Os09g36800 | Os09g0539100 | - | Detail |
| CX9g056453 | 9:18,411,497-18,416,813 | + | C1H9g23415 | C2H9g21684 | LOC_Os09g36810 | Os09g0539200 | - | Detail |