| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g12434 | 5:17,908,515-17,909,033 | - | C2H5g12625 | CX5g039543 | LOC_Os01g63800 | Os05g0447000 | - | Detail |
| C1H5g27944 | 5:17,914,383-17,920,136 | - | C2H5g25449 | CX5g036820 | LOC_Os05g37470 | Os05g0447200 | - | Detail |
| C1H5g12420 | 5:17,930,866-17,947,371 | - | C2H5g25292 | CX5g036851 | LOC_Os05g37500 | Os05g0447580 | - | Detail |
| C1H5g24273 | 5:17,951,935-17,953,651 | - | C2H5g15162 | CX5g040386 | LOC_Os05g37520 | Os05g0447700 | - | Detail |
| C1H5g03822 | 5:17,965,997-17,970,066 | + | C2H5g11261 | CX5g039030 | LOC_Os05g37600 | Os05g0448300 | - | Detail |
| C1H5g28240 | 5:17,983,558-17,984,565 | + | C2H5g08320 | CX5g039241 | LOC_Os05g37640 | Os05g0448675 | - | Detail |
| C1H5g23210 | 5:17,985,368-17,988,998 | - | C2H5g04056 | CX5g040111 | LOC_Os05g37660 | Os05g0449200 | - | Detail |
| C1H5g08417 | 5:18,002,067-18,005,035 | + | C2H5g04693 | CX5g037128 | LOC_Os05g37690 | Os05g0449500 | OsCOI1b, OsCOI1H, OsFbox260, Os_F0646 | Detail |
| C1H5g11760 | 5:18,007,705-18,008,679 | - | - | - | - | - | - | Detail |
| C1H5g01253 | 5:18,013,707-18,018,179 | + | C2H5g26890 | CX5g040292 | LOC_Os05g37700 | Os05g0449600 | - | Detail |
| C1H5g19157 | 5:18,027,523-18,028,593 | - | C2H5g03693 | CX5g037176 | LOC_Os05g37730 | Os05g0449900 | Os2R_MYB57 | Detail |
| C1H5g14659 | 5:18,054,743-18,055,554 | + | C2H5g27025 | CX5g037869 | LOC_Os05g37780 | Os05g0450300 | - | Detail |
| C1H5g01767 | 5:18,070,624-18,072,612 | + | C2H5g25395 | CX5g039495 | LOC_Os05g37800 | Os05g0450600 | - | Detail |
| C1H5g07138 | 5:18,084,762-18,088,447 | + | C2H5g19098 | CX5g038272 | LOC_Os05g37820 | Os05g0451100 | OsPHT4;2 | Detail |
| C1H5g30639 | 5:18,088,988-18,091,070 | - | C2H5g23791 | CX5g039929 | LOC_Os05g37830 | Os05g0451300 | - | Detail |
| C1H5g02168 | 5:18,102,688-18,106,650 | + | C2H5g16211 | CX5g038310 | LOC_Os05g37880 | Os05g0451900 | - | Detail |
| C1H5g16782 | 5:18,125,599-18,129,272 | + | C2H5g20030 | CX5g039202 | LOC_Os05g37900 | Os05g0452800 | - | Detail |
| C1H5g18778 | 5:18,136,424-18,140,608 | - | C2H5g10306 | CX5g037978 | LOC_Os05g37910 | Os05g0452900 | OsIPCS2 | Detail |
| C1H5g17967 | 5:18,160,153-18,162,777 | - | C2H5g09041 | CX5g039197 | LOC_Os05g37930 | Os05g0453300 | - | Detail |
| C1H5g08818 | 5:18,182,239-18,186,111 | - | C2H5g15966 | CX5g040447 | LOC_Os05g37950 | Os05g0453500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057976 | 9:18,177,077-18,178,749 | - | C1H9g28442 | C2H9g01514 | LOC_Os09g36340 | Os09g0533800 | - | Detail |
| CX9g057631 | 9:18,180,178-18,183,946 | - | C1H9g00314 | C2H9g09621 | LOC_Os09g36350 | Os09g0533900 | - | Detail |
| CX9g058091 | 9:18,187,040-18,189,440 | - | C1H9g18045 | C2H9g29726 | LOC_Os09g36360 | Os09g0534000 | - | Detail |
| CX9g055858 | 9:18,192,687-18,196,460 | + | C1H9g14355 | C2H9g06995 | LOC_Os09g36370 | Os09g0534200 | - | Detail |
| CX9g058141 | 9:18,201,151-18,203,879 | + | C1H9g04179 | C2H9g24532 | LOC_Os09g36440 | Os09g0534800 | - | Detail |
| CX9g055137 | 9:18,205,781-18,208,852 | - | C1H9g22452 | C2H9g26686 | LOC_Os09g36450 | Os09g0535000 | - | Detail |
| CX9g057768 | 9:18,209,822-18,212,286 | + | C1H9g27668 | C2H9g12415 | LOC_Os09g36460 | Os09g0535100 | - | Detail |
| CX9g056220 | 9:18,218,092-18,220,746 | + | C1H9g23309 | C2H9g19017 | LOC_Os09g36470 | Os09g0535200 | - | Detail |
| CX9g056638 | 9:18,221,633-18,224,767 | + | C1H9g30113 | C2H9g02266 | LOC_Os09g36480 | Os09g0535300 | - | Detail |
| CX9g056037 | 9:18,225,751-18,227,010 | + | C1H9g12056 | - | LOC_Os09g36490 | Os09g0535400 | GAPLESS3 | Detail |
| CX9g056226 | 9:18,228,640-18,229,278 | - | C1H9g17391 | C2H9g03371 | LOC_Os09g36500 | Os09g0535500 | - | Detail |
| CX9g055022 | 9:18,232,331-18,233,287 | - | C1H9g02156 | C2H9g18632 | LOC_Os09g36520 | Os09g0535900 | - | Detail |
| CX9g057534 | 9:18,239,651-18,243,690 | - | C1H9g18132 | C2H9g08077 | LOC_Os09g36530 | Os09g0536000 | - | Detail |
| CX9g057483 | 9:18,247,223-18,249,317 | + | C1H9g05295 | - | LOC_Os09g36550 | Os09g0536200 | - | Detail |
| CX9g056622 | 9:18,258,806-18,259,260 | - | C1H9g18306 | - | LOC_Os09g32790 | - | - | Detail |
| CX9g055542 | 9:18,260,394-18,262,147 | + | C1H9g23828 | C2H9g01597 | LOC_Os09g36560 | Os09g0536300 | - | Detail |
| CX9g056300 | 9:18,273,109-18,275,400 | + | C1H9g17095 | C2H9g27916 | LOC_Os09g36580 | Os09g0536400 | - | Detail |
| CX9g058189 | 9:18,281,352-18,281,545 | - | - | - | - | Os07g0616100 | - | Detail |
| CX9g057416 | 9:18,282,557-18,285,246 | - | C1H9g11028 | C2H9g02676 | LOC_Os09g36600 | Os09g0536700 | - | Detail |
| CX9g056883 | 9:18,295,228-18,295,515 | - | C1H9g01000 | - | LOC_Os09g36619 | Os09g0537000 | - | Detail |