| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31003 | 1:30,862,727-30,864,175 | + | C2H1g17151 | CX1g004658 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| C1H1g02777 | 1:30,865,159-30,868,765 | - | C2H1g11561 | CX1g001519 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| C1H1g09791 | 1:30,869,157-30,870,725 | + | C2H1g13748 | CX1g001573 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| C1H1g00772 | 1:30,872,324-30,873,477 | - | C2H1g09624 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C1H1g28423 | 1:30,876,795-30,877,082 | + | - | - | - | - | - | Detail |
| C1H1g15712 | 1:30,885,496-30,901,935 | - | C2H1g09286 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C1H1g15897 | 1:30,910,322-30,914,693 | - | C2H1g26961 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C1H1g04794 | 1:30,917,388-30,922,442 | + | C2H1g04146 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C1H1g24642 | 1:30,925,590-30,927,056 | + | C2H1g24791 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g24879 | 1:30,927,149-30,927,451 | + | C2H1g25178 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g23182 | 1:30,932,403-30,935,578 | - | C2H1g12383 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C1H1g20937 | 1:30,938,410-30,941,850 | - | C2H1g27536 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C1H1g16273 | 1:30,946,537-30,949,653 | + | C2H1g05301 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C1H1g27130 | 1:30,950,380-30,950,676 | + | - | CX1g006550 | - | - | - | Detail |
| C1H1g15906 | 1:30,951,096-30,951,678 | - | C2H1g04044 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g18287 | 1:30,959,654-30,960,304 | + | C2H1g27953 | CX1g005753 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| C1H1g14583 | 1:30,963,679-30,967,446 | + | C2H1g17170 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C1H1g28961 | 1:30,967,898-30,971,189 | - | C2H1g22450 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C1H1g28985 | 1:30,983,428-30,987,645 | + | C2H1g03576 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C1H1g10378 | 1:30,991,363-30,992,829 | + | C2H1g16399 | CX1g005236 | - | Os01g0818100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056838 | 9:18,020,528-18,021,945 | - | - | C2H9g13265 | LOC_Os09g36140 | Os09g0531200 | - | Detail |
| CX9g057009 | 9:18,024,522-18,024,704 | + | - | - | - | - | - | Detail |
| CX9g056873 | 9:18,030,196-18,030,696 | + | - | - | - | - | - | Detail |
| CX9g057463 | 9:18,041,685-18,042,720 | - | C1H9g07449 | C2H9g23806 | LOC_Os09g36160 | Os09g0531600 | OsSHI1 | Detail |
| CX9g055764 | 9:18,051,385-18,053,003 | - | C1H9g12530 | C2H9g17548 | LOC_Os09g36180 | Os09g0531701 | - | Detail |
| CX9g056588 | 9:18,056,221-18,059,790 | - | C1H9g31859 | C2H9g24133 | LOC_Os09g36190 | Os09g0531800 | - | Detail |
| CX9g057674 | 9:18,061,523-18,065,182 | - | C1H9g23936 | C2H9g14007 | LOC_Os09g36190 | Os09g0531900 | OsPDT1 | Detail |
| CX9g054875 | 9:18,067,393-18,069,076 | - | C1H9g17840 | C2H9g15175 | LOC_Os09g36200 | Os09g0532000 | SGR, sgr(t), sgr, OsSGR | Detail |
| CX9g056508 | 9:18,077,875-18,078,663 | - | C1H9g30254 | C2H9g26470 | LOC_Os09g36210 | Os09g0532200 | - | Detail |
| CX9g056292 | 9:18,080,843-18,084,984 | - | C1H9g21979 | C2H9g26470 | LOC_Os09g36220 | Os09g0532400 | - | Detail |
| CX9g055999 | 9:18,090,968-18,092,188 | + | C1H9g08491 | C2H9g17997 | LOC_Os09g36230 | Os09g0532800 | - | Detail |
| CX9g056475 | 9:18,094,143-18,100,587 | + | C1H9g13364 | C2H9g13859 | LOC_Os09g36240 | Os09g0532700 | - | Detail |
| CX9g055493 | 9:18,103,177-18,103,524 | + | C1H9g05830 | - | - | - | - | Detail |
| CX9g056485 | 9:18,109,493-18,113,282 | - | C1H9g27789 | C2H9g15904 | LOC_Os09g36250 | Os09g0532900 | - | Detail |
| CX9g056669 | 9:18,125,608-18,134,912 | + | C1H9g20819 | C2H9g18689 | LOC_Os09g36270 | Os09g0533100 | - | Detail |
| CX9g055747 | 9:18,135,613-18,136,665 | - | C1H9g16977 | C2H9g03541 | LOC_Os09g36280 | Os09g0533200 | - | Detail |
| CX9g057930 | 9:18,147,794-18,150,636 | + | C1H9g06683 | C2H9g17268 | LOC_Os09g36290 | Os09g0533300 | - | Detail |
| CX9g055811 | 9:18,151,393-18,157,742 | - | C1H9g09436 | C2H9g04093 | LOC_Os09g36300 | Os09g0533400 | OsLon1 | Detail |
| CX9g055531 | 9:18,165,912-18,170,882 | - | C1H9g22235 | C2H9g07165 | LOC_Os09g36320 | Os09g0533600 | BSR1 | Detail |
| CX9g055584 | 9:18,175,168-18,175,317 | + | - | - | - | Os07g0616100 | - | Detail |