| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g17168 | 3:26,925,068-26,927,470 | + | C1H3g19413 | CX3g030963 | LOC_Os03g51240 | Os03g0722500 | - | Detail |
| C2H3g09804 | 3:26,927,684-26,932,236 | - | C1H3g19235 | CX3g028000 | LOC_Os03g51250 | Os03g0722600 | - | Detail |
| C2H3g23515 | 3:26,960,809-26,961,797 | + | C1H3g19621 | CX3g025582 | LOC_Os03g51340 | - | - | Detail |
| C2H3g08290 | 3:26,966,779-26,967,821 | + | C1H3g18910 | CX3g030020 | LOC_Os03g51350 | Os03g0723400 | - | Detail |
| C2H3g16773 | 3:26,974,616-26,978,336 | + | C1H3g18603 | CX3g027992 | LOC_Os03g51380 | Os03g0723600 | - | Detail |
| C2H3g17511 | 3:26,985,490-26,986,662 | - | - | - | - | - | - | Detail |
| C2H3g11512 | 3:27,005,216-27,006,777 | + | C1H3g29238 | CX3g025224 | LOC_Os03g51430 | Os03g0724100 | OsSec14-11 | Detail |
| C2H3g26453 | 3:27,008,365-27,012,042 | - | C1H3g20683 | CX3g028077 | LOC_Os03g51440 | Os03g0724300 | - | Detail |
| C2H3g05139 | 3:27,029,616-27,030,005 | - | C1H3g30120 | CX3g025441 | LOC_Os03g51459 | Os03g0724500 | - | Detail |
| C2H3g13019 | 3:27,032,755-27,034,727 | - | C1H3g05968 | CX3g025693 | LOC_Os03g51470 | Os03g0724600 | - | Detail |
| C2H3g05753 | 3:27,035,639-27,037,223 | + | C1H3g04363 | CX3g027196 | LOC_Os03g51479 | Os03g0724700 | - | Detail |
| C2H3g12890 | 3:27,045,422-27,045,733 | + | C1H3g15090 | CX3g028977 | LOC_Os03g51510 | Os03g0725000 | - | Detail |
| C2H3g20716 | 3:27,047,194-27,056,996 | + | C1H3g02037 | CX3g030919 | LOC_Os03g51520 | Os03g0725100 | - | Detail |
| C2H3g06290 | 3:27,058,656-27,064,437 | + | C1H3g18345 | CX3g029201 | LOC_Os03g51530 | Os03g0725200 | - | Detail |
| C2H3g04142 | 3:27,065,261-27,069,025 | + | C1H3g09008 | CX3g028312 | LOC_Os03g51550 | Os03g0725400 | - | Detail |
| C2H3g06970 | 3:27,096,786-27,099,211 | + | C1H3g28685 | CX3g029203 | LOC_Os03g51580 | Os03g0725800 | - | Detail |
| C2H3g30221 | 3:27,102,367-27,103,395 | + | - | - | - | - | - | Detail |
| C2H3g21598 | 3:27,113,077-27,116,055 | + | C1H3g18025 | CX3g026793 | LOC_Os03g51600 | Os03g0726100 | - | Detail |
| C2H3g10415 | 3:27,122,480-27,128,188 | + | C1H3g31013 | CX3g027533 | LOC_Os03g51610 | Os03g0726200 | - | Detail |
| C2H3g30083 | 3:27,130,646-27,135,460 | - | C1H3g03565 | CX3g030086 | LOC_Os03g51620 | Os03g0726300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055267 | 9:17,858,779-17,861,730 | - | C1H9g07553 | C2H9g07509 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| CX9g055134 | 9:17,867,534-17,871,418 | + | C1H9g01949 | C2H9g28114 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| CX9g056632 | 9:17,872,366-17,872,623 | + | C1H9g14577 | - | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| CX9g055268 | 9:17,883,074-17,883,917 | + | C1H9g05805 | C2H9g04300 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| CX9g055503 | 9:17,887,539-17,889,756 | - | C1H9g07637 | C2H9g16123 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| CX9g055183 | 9:17,900,863-17,902,698 | + | C1H9g29475 | C2H9g26896 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| CX9g055032 | 9:17,929,885-17,934,222 | - | C1H9g30526 | C2H9g28773 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| CX9g056476 | 9:17,938,558-17,941,277 | - | C1H9g28769 | C2H9g02120 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| CX9g055769 | 9:17,945,618-17,946,905 | - | C1H9g03629 | C2H9g25877 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| CX9g055262 | 9:17,949,422-17,951,832 | - | C1H9g03629 | C2H9g25877 | LOC_Os09g35990 | Os09g0529350 | - | Detail |
| CX9g056579 | 9:17,953,861-17,954,976 | - | C1H9g19525 | C2H9g23489 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| CX9g056877 | 9:17,955,567-17,957,819 | - | C1H9g27128 | C2H9g27445 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| CX9g055906 | 9:17,960,748-17,964,590 | + | C1H9g05809 | C2H9g23825 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| CX9g056800 | 9:17,972,648-17,975,685 | + | C1H9g07466 | C2H9g28583 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| CX9g057922 | 9:17,976,470-17,978,678 | + | C1H9g12433 | C2H9g03363 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| CX9g056469 | 9:17,986,790-17,988,414 | + | C1H9g17904 | C2H9g23341 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| CX9g057701 | 9:17,990,233-17,998,603 | + | C1H9g17327 | C2H9g22638 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| CX9g055918 | 9:17,999,648-18,001,770 | + | C1H9g09404 | C2H9g01014 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| CX9g055471 | 9:18,007,791-18,011,105 | + | C1H9g23871 | C2H9g12131 | LOC_Os09g36110 | Os09g0530800 | - | Detail |
| CX9g057214 | 9:18,011,513-18,016,244 | - | C1H9g24630 | C2H9g01895 | LOC_Os09g36120 | Os09g0530900 | - | Detail |