| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g03816 | 1:2,178,074-2,180,248 | - | C2H1g27793 | - | LOC_Os01g05450 | Os01g0147600 | - | Detail |
| C1H1g25686 | 1:2,181,635-2,184,291 | - | C2H1g00931 | - | LOC_Os01g05460 | Os01g0147600 | - | Detail |
| C1H1g30607 | 1:2,185,987-2,188,332 | - | C2H1g02244 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C1H1g11928 | 1:2,191,347-2,200,110 | - | C2H1g25353 | CX1g003030 | LOC_Os01g05470 | Os01g0147700 | - | Detail |
| C1H1g17304 | 1:2,202,348-2,206,420 | - | C2H1g29480 | CX1g005120 | LOC_Os01g05480 | Os01g0147800 | - | Detail |
| C1H1g08404 | 1:2,207,371-2,211,040 | - | C2H1g30066 | CX1g006525 | LOC_Os01g05490 | Os01g0147900 | OsTPI1, OsTPI1.1 | Detail |
| C1H1g03903 | 1:2,216,879-2,229,802 | + | C2H1g25150 | CX1g001423 | LOC_Os01g05500 | Os01g0148000 | - | Detail |
| C1H1g22469 | 1:2,245,294-2,248,834 | - | C2H1g06791 | CX1g006643 | LOC_Os01g05640 | Os01g0149700 | KINt1 | Detail |
| C1H1g18521 | 1:2,250,673-2,252,104 | - | C2H1g28846 | - | LOC_Os01g05650 | Os01g0149800 | - | Detail |
| C1H1g17924 | 1:2,256,667-2,260,515 | - | C2H1g25044 | CX1g006502 | LOC_Os01g05660 | Os01g0149900 | - | Detail |
| C1H1g30008 | 1:2,265,914-2,269,572 | - | C2H1g00511 | CX1g002286 | LOC_Os01g05670 | Os01g0150000 | - | Detail |
| C1H1g15806 | 1:2,272,333-2,275,964 | + | C2H1g17834 | CX1g000079 | LOC_Os01g05680 | Os01g0150100 | OsPGGT I-β | Detail |
| C1H1g16095 | 1:2,276,915-2,277,206 | + | C2H1g21300 | CX4g035052 | LOC_Os01g05720 | Os01g0150200 | - | Detail |
| C1H1g24721 | 1:2,278,047-2,279,684 | + | C2H1g21300 | CX4g035052 | LOC_Os01g05694 | Os01g0150200 | - | Detail |
| C1H1g12773 | 1:2,281,434-2,284,860 | + | C2H1g19488 | - | LOC_Os01g05760 | Os01g0150400 | - | Detail |
| C1H1g02086 | 1:2,286,429-2,289,397 | + | C2H1g06641 | - | LOC_Os01g05720 | Os01g0150800 | - | Detail |
| C1H1g24478 | 1:2,294,882-2,297,822 | + | C2H1g05176 | - | LOC_Os01g05760 | Os01g0150800 | - | Detail |
| C1H1g14864 | 1:2,300,295-2,301,415 | + | C2H1g05176 | - | LOC_Os01g05744 | Os01g0150800 | - | Detail |
| C1H1g31823 | 1:2,309,978-2,313,212 | + | C2H1g04685 | CX1g006444 | LOC_Os01g05800 | Os01g0151200 | OsALB3 | Detail |
| C1H1g06017 | 1:2,316,041-2,320,870 | + | C2H1g05574 | CX1g002082 | LOC_Os01g05810 | Os01g0151400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055267 | 9:17,858,779-17,861,730 | - | C1H9g07553 | C2H9g07509 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| CX9g055134 | 9:17,867,534-17,871,418 | + | C1H9g01949 | C2H9g28114 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| CX9g056632 | 9:17,872,366-17,872,623 | + | C1H9g14577 | - | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| CX9g055268 | 9:17,883,074-17,883,917 | + | C1H9g05805 | C2H9g04300 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| CX9g055503 | 9:17,887,539-17,889,756 | - | C1H9g07637 | C2H9g16123 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| CX9g055183 | 9:17,900,863-17,902,698 | + | C1H9g29475 | C2H9g26896 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| CX9g055032 | 9:17,929,885-17,934,222 | - | C1H9g30526 | C2H9g28773 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| CX9g056476 | 9:17,938,558-17,941,277 | - | C1H9g28769 | C2H9g02120 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| CX9g055769 | 9:17,945,618-17,946,905 | - | C1H9g03629 | C2H9g25877 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| CX9g055262 | 9:17,949,422-17,951,832 | - | C1H9g03629 | C2H9g25877 | LOC_Os09g35990 | Os09g0529350 | - | Detail |
| CX9g056579 | 9:17,953,861-17,954,976 | - | C1H9g19525 | C2H9g23489 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| CX9g056877 | 9:17,955,567-17,957,819 | - | C1H9g27128 | C2H9g27445 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| CX9g055906 | 9:17,960,748-17,964,590 | + | C1H9g05809 | C2H9g23825 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| CX9g056800 | 9:17,972,648-17,975,685 | + | C1H9g07466 | C2H9g28583 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| CX9g057922 | 9:17,976,470-17,978,678 | + | C1H9g12433 | C2H9g03363 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| CX9g056469 | 9:17,986,790-17,988,414 | + | C1H9g17904 | C2H9g23341 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| CX9g057701 | 9:17,990,233-17,998,603 | + | C1H9g17327 | C2H9g22638 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| CX9g055918 | 9:17,999,648-18,001,770 | + | C1H9g09404 | C2H9g01014 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| CX9g055471 | 9:18,007,791-18,011,105 | + | C1H9g23871 | C2H9g12131 | LOC_Os09g36110 | Os09g0530800 | - | Detail |
| CX9g057214 | 9:18,011,513-18,016,244 | - | C1H9g24630 | C2H9g01895 | LOC_Os09g36120 | Os09g0530900 | - | Detail |