| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01190 | 1:24,984,174-24,987,077 | + | C2H1g15446 | CX1g006805 | LOC_Os01g48930 | Os01g0681600 | - | Detail |
| C1H1g12744 | 1:24,995,411-25,007,176 | - | C2H1g14692 | CX1g000610 | LOC_Os01g48960 | Os01g0681900 | OsGOGAT1, NADH-GOGAT1 | Detail |
| C1H1g07001 | 1:25,023,129-25,028,085 | - | C2H1g11093 | CX1g000049 | LOC_Os01g48980 | Os01g0682200 | - | Detail |
| C1H1g06026 | 1:25,030,417-25,034,298 | + | C2H1g19818 | CX1g000149 | LOC_Os01g48990 | Os01g0682500 | - | Detail |
| C1H1g18921 | 1:25,034,677-25,041,336 | + | C2H1g30064 | CX1g000149 | LOC_Os01g49000 | Os01g0683100 | - | Detail |
| C1H1g07773 | 1:25,064,944-25,068,750 | + | C2H1g03389 | - | LOC_Os01g49010 | Os01g0683400 | OsORC4 | Detail |
| C1H1g21597 | 1:25,068,927-25,076,322 | - | C2H1g19532 | CX5g038117 | LOC_Os01g49024 | Os01g0683550 | - | Detail |
| C1H1g21001 | 1:25,078,174-25,080,264 | + | C2H1g08995 | CX1g002822 | LOC_Os01g49026 | Os01g0683600 | - | Detail |
| C1H1g08336 | 1:25,081,353-25,082,226 | + | C2H1g03855 | CX1g003922 | LOC_Os01g49030 | Os01g0683700 | - | Detail |
| C1H1g07796 | 1:25,123,183-25,126,721 | + | C2H1g15370 | CX1g000472 | LOC_Os01g49060 | Os01g0684800 | - | Detail |
| C1H1g29982 | 1:25,127,179-25,130,561 | - | C2H1g12213 | CX1g001799 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| C1H1g28582 | 1:25,133,148-25,133,829 | + | - | CX1g003066 | LOC_Os01g45100 | Os01g0117000 | - | Detail |
| C1H1g11448 | 1:25,135,044-25,138,407 | - | C2H1g09209 | CX1g003730 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| C1H1g30171 | 1:25,141,963-25,143,113 | + | C2H1g29921 | CX1g007197 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| C1H1g13712 | 1:25,153,436-25,164,749 | - | C2H1g15034 | CX1g004222 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| C1H1g18062 | 1:25,169,415-25,173,735 | + | C2H1g05241 | CX1g004551 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| C1H1g18271 | 1:25,174,806-25,179,342 | + | C2H1g18560 | CX1g003807 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| C1H1g07342 | 1:25,187,753-25,190,296 | + | C2H1g28047 | CX1g002173 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| C1H1g14493 | 1:25,192,483-25,193,901 | + | C2H1g26387 | CX1g002143 | LOC_Os01g49240 | Os01g0686300 | - | Detail |
| C1H1g17022 | 1:25,197,386-25,202,413 | + | C2H1g21728 | CX1g000503 | LOC_Os01g49250 | Os01g0686400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055267 | 9:17,858,779-17,861,730 | - | C1H9g07553 | C2H9g07509 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| CX9g055134 | 9:17,867,534-17,871,418 | + | C1H9g01949 | C2H9g28114 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| CX9g056632 | 9:17,872,366-17,872,623 | + | C1H9g14577 | - | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| CX9g055268 | 9:17,883,074-17,883,917 | + | C1H9g05805 | C2H9g04300 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| CX9g055503 | 9:17,887,539-17,889,756 | - | C1H9g07637 | C2H9g16123 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| CX9g055183 | 9:17,900,863-17,902,698 | + | C1H9g29475 | C2H9g26896 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| CX9g055032 | 9:17,929,885-17,934,222 | - | C1H9g30526 | C2H9g28773 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| CX9g056476 | 9:17,938,558-17,941,277 | - | C1H9g28769 | C2H9g02120 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| CX9g055769 | 9:17,945,618-17,946,905 | - | C1H9g03629 | C2H9g25877 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| CX9g055262 | 9:17,949,422-17,951,832 | - | C1H9g03629 | C2H9g25877 | LOC_Os09g35990 | Os09g0529350 | - | Detail |
| CX9g056579 | 9:17,953,861-17,954,976 | - | C1H9g19525 | C2H9g23489 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| CX9g056877 | 9:17,955,567-17,957,819 | - | C1H9g27128 | C2H9g27445 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| CX9g055906 | 9:17,960,748-17,964,590 | + | C1H9g05809 | C2H9g23825 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| CX9g056800 | 9:17,972,648-17,975,685 | + | C1H9g07466 | C2H9g28583 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| CX9g057922 | 9:17,976,470-17,978,678 | + | C1H9g12433 | C2H9g03363 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| CX9g056469 | 9:17,986,790-17,988,414 | + | C1H9g17904 | C2H9g23341 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| CX9g057701 | 9:17,990,233-17,998,603 | + | C1H9g17327 | C2H9g22638 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| CX9g055918 | 9:17,999,648-18,001,770 | + | C1H9g09404 | C2H9g01014 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| CX9g055471 | 9:18,007,791-18,011,105 | + | C1H9g23871 | C2H9g12131 | LOC_Os09g36110 | Os09g0530800 | - | Detail |
| CX9g057214 | 9:18,011,513-18,016,244 | - | C1H9g24630 | C2H9g01895 | LOC_Os09g36120 | Os09g0530900 | - | Detail |