| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08519 | 2:29,141,433-29,143,056 | + | C1H2g00252 | CX2g020923 | LOC_Os02g51930 | Os02g0755900 | UGT3, OsUGT3 | Detail |
| C2H2g01748 | 2:29,147,906-29,148,339 | - | C1H2g13826 | - | LOC_Os02g51950 | Os02g0756100 | OsEPFL2 | Detail |
| C2H2g05080 | 2:29,152,297-29,153,223 | - | - | CX2g022296 | LOC_Os02g51970 | Os02g0756200 | - | Detail |
| C2H2g26812 | 2:29,156,931-29,157,872 | - | - | CX2g020271 | LOC_Os02g52000 | Os02g0756600 | - | Detail |
| C2H2g05361 | 2:29,162,413-29,163,399 | - | - | CX2g023021 | LOC_Os02g52010 | Os02g0756800 | - | Detail |
| C2H2g24893 | 2:29,167,598-29,168,533 | + | - | CX2g023021 | LOC_Os02g52040 | Os02g0757100 | - | Detail |
| C2H2g04860 | 2:29,170,382-29,170,867 | + | C1H2g18356 | CX2g023173 | LOC_Os02g52120 | - | - | Detail |
| C2H2g26225 | 2:29,181,681-29,184,421 | + | C1H2g11994 | CX2g020517 | LOC_Os02g52130 | Os02g0757700 | - | Detail |
| C2H2g01455 | 2:29,189,079-29,192,926 | - | C1H2g00307 | CX2g020566 | LOC_Os02g52140 | Os02g0757900 | - | Detail |
| C2H2g25477 | 2:29,193,325-29,194,091 | + | C1H2g27632 | CX2g023549 | LOC_Os02g52150 | Os02g0758000 | - | Detail |
| C2H2g06385 | 2:29,196,727-29,203,669 | + | C1H2g13642 | CX2g020363 | LOC_Os02g52160 | Os02g0758100 | - | Detail |
| C2H2g03849 | 2:29,205,721-29,206,956 | - | C1H11g05948 | - | - | - | - | Detail |
| C2H2g18730 | 2:29,206,981-29,207,538 | - | - | CX2g019906 | LOC_Os02g52170 | Os02g0758200 | - | Detail |
| C2H2g20568 | 2:29,214,455-29,215,381 | - | C1H2g09312 | CX2g018879 | LOC_Os02g52180 | Os02g0758800 | - | Detail |
| C2H2g15822 | 2:29,222,248-29,224,174 | - | C1H2g17070 | CX2g019685 | LOC_Os02g52190 | Os02g0759000 | OsbHLH048 | Detail |
| C2H2g05043 | 2:29,229,731-29,231,020 | + | C1H2g26668 | CX2g024667 | LOC_Os02g52210 | Os02g0759400 | OsATL38 | Detail |
| C2H2g17235 | 2:29,233,107-29,234,774 | + | C1H2g20944 | CX2g023989 | LOC_Os02g52220 | Os02g0759500 | - | Detail |
| C2H2g04549 | 2:29,242,219-29,245,361 | + | C1H2g18903 | CX2g021992 | LOC_Os02g52230 | Os02g0759700 | - | Detail |
| C2H2g21014 | 2:29,251,307-29,253,130 | - | - | CX2g023109 | LOC_Os02g52250 | Os02g0759800 | - | Detail |
| C2H2g22565 | 2:29,254,168-29,254,458 | - | - | - | - | Os02g0286500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055247 | 9:17,574,210-17,574,688 | - | C1H9g20303 | C2H9g09976 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| CX9g055700 | 9:17,578,386-17,582,082 | + | C1H9g03744 | C2H9g00711 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| CX9g057087 | 9:17,583,228-17,585,123 | + | C1H9g28676 | C2H9g12996 | LOC_Os09g34870 | Os09g0520300 | - | Detail |
| CX9g057384 | 9:17,587,782-17,591,212 | + | C1H9g02310 | C2H9g21344 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| CX9g055638 | 9:17,592,106-17,593,024 | - | C1H9g04530 | C2H9g01771 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| CX9g056986 | 9:17,598,595-17,599,998 | + | C1H9g24828 | C2H9g21190 | LOC_Os09g32780 | - | - | Detail |
| CX9g055686 | 9:17,603,068-17,605,898 | - | C1H9g25767 | C2H9g04653 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| CX9g058165 | 9:17,608,176-17,612,394 | + | C1H9g15041 | C2H9g24414 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| CX9g057097 | 9:17,614,537-17,616,210 | - | C1H9g08027 | C2H9g26435 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| CX9g056068 | 9:17,622,120-17,623,734 | + | C1H9g02380 | C2H9g20646 | LOC_Os09g34930 | Os09g0521100 | - | Detail |
| CX9g056653 | 9:17,629,141-17,629,855 | - | - | - | - | - | - | Detail |
| CX9g057233 | 9:17,632,784-17,636,071 | + | C1H9g10520 | C2H9g14810 | LOC_Os09g34960 | Os09g0521400 | - | Detail |
| CX9g055738 | 9:17,637,480-17,640,560 | - | C1H9g25845 | C2H9g26372 | LOC_Os09g34970 | Os09g0521500 | - | Detail |
| CX9g056886 | 9:17,642,506-17,646,694 | - | C1H9g12508 | C2H9g23293 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| CX9g058042 | 9:17,649,255-17,653,047 | + | C1H9g22775 | C2H9g12959 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| CX9g056315 | 9:17,654,916-17,655,584 | - | C1H9g14501 | C2H9g15745 | LOC_Os09g35010 | Os09g0522000 | OsDREB1B | Detail |
| CX9g057270 | 9:17,658,490-17,659,230 | - | C1H9g18822 | C2H9g10409 | LOC_Os09g35020 | Os09g0522100 | - | Detail |
| CX9g055958 | 9:17,662,880-17,663,629 | - | C1H9g24368 | C2H9g10409 | LOC_Os09g35030 | Os09g0522200 | OsDREB1A | Detail |
| CX9g058114 | 9:17,673,838-17,674,503 | + | C1H9g26152 | C2H9g20787 | LOC_Os09g26420 | Os09g0434500 | - | Detail |
| CX9g055483 | 9:17,696,246-17,696,464 | + | - | - | - | - | - | Detail |