| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00191 | 4:19,110,754-19,113,757 | + | C2H4g01897 | CX4g032281 | LOC_Os04g36030 | Os04g0441600 | - | Detail |
| C1H4g13060 | 4:19,114,153-19,122,019 | - | C2H4g24357 | CX4g035996 | LOC_Os04g36040 | Os04g0441800 | - | Detail |
| C1H4g02511 | 4:19,136,602-19,141,831 | - | C2H4g29140 | CX4g032297 | LOC_Os04g36050 | Os04g0441900 | - | Detail |
| C1H4g15146 | 4:19,153,750-19,159,356 | + | C2H4g08658 | CX4g031774 | LOC_Os04g36054 | Os04g0442000 | - | Detail |
| C1H4g04027 | 4:19,160,892-19,163,877 | + | C2H4g05600 | CX4g032848 | LOC_Os04g36058 | Os04g0442100 | - | Detail |
| C1H4g03235 | 4:19,164,641-19,170,727 | + | C2H4g02031 | CX4g032844 | LOC_Os04g36062 | Os04g0442200 | - | Detail |
| C1H4g10758 | 4:19,171,471-19,174,218 | - | C2H4g03287 | CX4g032393 | LOC_Os04g36070 | Os04g0442300 | OSRR1, OsRR1, rr1 | Detail |
| C1H4g26146 | 4:19,192,118-19,201,055 | - | C2H4g22500 | CX4g035405 | LOC_Os04g55210 | Os04g0644800 | - | Detail |
| C1H4g15259 | 4:19,207,747-19,210,682 | + | C2H4g11490 | CX4g034447 | LOC_Os04g36590 | Os04g0443000 | - | Detail |
| C1H4g17049 | 4:19,214,444-19,216,820 | - | C2H4g03344 | CX4g035257 | LOC_Os04g36610 | Os04g0443300 | - | Detail |
| C1H4g17756 | 4:19,219,922-19,224,859 | + | C2H4g03529 | CX4g035888 | LOC_Os04g36620 | Os04g0443500 | - | Detail |
| C1H4g01798 | 4:19,227,117-19,228,073 | - | C2H4g04866 | CX4g033892 | LOC_Os04g36630 | Os04g0443700 | - | Detail |
| C1H4g31012 | 4:19,228,092-19,229,264 | - | - | - | - | Os04g0443700 | - | Detail |
| C1H4g18679 | 4:19,243,359-19,245,949 | + | C2H4g27645 | CX4g032714 | - | - | - | Detail |
| C1H4g12300 | 4:19,246,323-19,246,653 | + | C2H4g25258 | CX4g035206 | - | - | - | Detail |
| C1H4g31484 | 4:19,246,667-19,251,427 | + | C2H4g28476 | CX4g035206 | LOC_Os04g39440 | Os04g0470100 | - | Detail |
| C1H4g20088 | 4:19,252,082-19,254,333 | - | C2H4g29633 | CX4g035579 | LOC_Os04g38770 | Os04g0461300 | - | Detail |
| C1H4g13594 | 4:19,260,039-19,264,348 | - | C2H4g08466 | CX4g031490 | LOC_Os02g35310 | Os02g0559400 | - | Detail |
| C1H4g03725 | 4:19,268,836-19,270,643 | - | C2H4g22154 | CX4g035579 | - | - | - | Detail |
| C1H4g06580 | 4:19,270,798-19,270,983 | - | C2H4g29633 | CX4g035579 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055247 | 9:17,574,210-17,574,688 | - | C1H9g20303 | C2H9g09976 | LOC_Os09g34850 | Os09g0520100 | - | Detail |
| CX9g055700 | 9:17,578,386-17,582,082 | + | C1H9g03744 | C2H9g00711 | LOC_Os09g34860 | Os09g0520200 | - | Detail |
| CX9g057087 | 9:17,583,228-17,585,123 | + | C1H9g28676 | C2H9g12996 | LOC_Os09g34870 | Os09g0520300 | - | Detail |
| CX9g057384 | 9:17,587,782-17,591,212 | + | C1H9g02310 | C2H9g21344 | LOC_Os09g34880 | Os09g0520400 | OsbZIP76 | Detail |
| CX9g055638 | 9:17,592,106-17,593,024 | - | C1H9g04530 | C2H9g01771 | LOC_Os09g34890 | Os09g0520500 | - | Detail |
| CX9g056986 | 9:17,598,595-17,599,998 | + | C1H9g24828 | C2H9g21190 | LOC_Os09g32780 | - | - | Detail |
| CX9g055686 | 9:17,603,068-17,605,898 | - | C1H9g25767 | C2H9g04653 | LOC_Os09g34900 | Os09g0520600 | - | Detail |
| CX9g058165 | 9:17,608,176-17,612,394 | + | C1H9g15041 | C2H9g24414 | LOC_Os09g34910 | Os09g0520700 | - | Detail |
| CX9g057097 | 9:17,614,537-17,616,210 | - | C1H9g08027 | C2H9g26435 | LOC_Os09g34920 | Os09g0520800 | - | Detail |
| CX9g056068 | 9:17,622,120-17,623,734 | + | C1H9g02380 | C2H9g20646 | LOC_Os09g34930 | Os09g0521100 | - | Detail |
| CX9g056653 | 9:17,629,141-17,629,855 | - | - | - | - | - | - | Detail |
| CX9g057233 | 9:17,632,784-17,636,071 | + | C1H9g10520 | C2H9g14810 | LOC_Os09g34960 | Os09g0521400 | - | Detail |
| CX9g055738 | 9:17,637,480-17,640,560 | - | C1H9g25845 | C2H9g26372 | LOC_Os09g34970 | Os09g0521500 | - | Detail |
| CX9g056886 | 9:17,642,506-17,646,694 | - | C1H9g12508 | C2H9g23293 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| CX9g058042 | 9:17,649,255-17,653,047 | + | C1H9g22775 | C2H9g12959 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| CX9g056315 | 9:17,654,916-17,655,584 | - | C1H9g14501 | C2H9g15745 | LOC_Os09g35010 | Os09g0522000 | OsDREB1B | Detail |
| CX9g057270 | 9:17,658,490-17,659,230 | - | C1H9g18822 | C2H9g10409 | LOC_Os09g35020 | Os09g0522100 | - | Detail |
| CX9g055958 | 9:17,662,880-17,663,629 | - | C1H9g24368 | C2H9g10409 | LOC_Os09g35030 | Os09g0522200 | OsDREB1A | Detail |
| CX9g058114 | 9:17,673,838-17,674,503 | + | C1H9g26152 | C2H9g20787 | LOC_Os09g26420 | Os09g0434500 | - | Detail |
| CX9g055483 | 9:17,696,246-17,696,464 | + | - | - | - | - | - | Detail |