| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g08492 | 9:11,011,555-11,012,362 | + | C1H9g24346 | CX9g056066 | - | - | - | Detail |
| C2H9g12793 | 9:11,012,860-11,015,222 | - | C1H9g24171 | CX9g054892 | LOC_Os09g21180 | Os09g0379600 | - | Detail |
| C2H9g20926 | 9:11,015,398-11,015,601 | + | - | CX9g057676 | - | - | - | Detail |
| C2H9g24966 | 9:11,031,110-11,033,332 | - | C1H9g09756 | CX9g056903 | LOC_Os09g21210 | Os09g0379900 | - | Detail |
| C2H9g07796 | 9:11,047,949-11,052,234 | + | C1H9g03748 | CX9g055882 | LOC_Os09g21230 | Os09g0380050 | - | Detail |
| C2H9g21407 | 9:11,057,959-11,061,264 | + | C1H9g24623 | CX9g055229 | LOC_Os09g21250 | Os09g0380200 | OsV<sub>5A</sub>, YLC1 | Detail |
| C2H9g10924 | 9:11,065,865-11,066,770 | + | - | CX9g055443 | - | Os09g0380400 | - | Detail |
| C2H9g29815 | 9:11,121,742-11,122,117 | - | - | - | - | - | - | Detail |
| C2H9g07225 | 9:11,144,145-11,148,573 | + | C1H9g04772 | CX9g055269 | LOC_Os09g21340 | Os09g0381100 | - | Detail |
| C2H9g24898 | 9:11,163,674-11,164,479 | + | C1H9g28518 | CX9g055525 | LOC_Os09g21380 | Os09g0381600 | - | Detail |
| C2H9g18647 | 9:11,173,284-11,180,309 | - | C1H9g19657 | CX9g056093 | LOC_Os09g21430 | Os09g0382120 | - | Detail |
| C2H9g06489 | 9:11,187,738-11,191,288 | - | C1H9g14369 | CX9g055130 | LOC_Os09g21450 | Os09g0382300 | - | Detail |
| C2H9g10297 | 9:11,194,610-11,196,401 | - | C1H9g10046 | CX9g058028 | LOC_Os09g21460 | Os09g0382400 | - | Detail |
| C2H9g07495 | 9:11,202,092-11,204,445 | - | C1H9g21689 | CX9g056330 | LOC_Os09g21470 | Os09g0382500 | - | Detail |
| C2H9g06304 | 9:11,215,871-11,216,947 | + | C1H9g23009 | CX9g055290 | LOC_Os09g21490 | - | - | Detail |
| C2H9g14634 | 9:11,233,854-11,239,362 | + | C1H9g07650 | CX9g055150 | LOC_Os09g21510 | Os09g0383300 | - | Detail |
| C2H9g24570 | 9:11,242,954-11,247,140 | + | C1H9g10004 | CX9g056451 | LOC_Os09g21520 | Os09g0383400 | - | Detail |
| C2H9g25223 | 9:11,351,400-11,351,925 | - | - | CX9g057054 | LOC_Os09g21689 | Os09g0385300 | - | Detail |
| C2H9g24035 | 9:11,366,004-11,368,008 | + | C1H9g25406 | - | - | - | - | Detail |
| C2H9g26646 | 9:11,377,865-11,381,595 | - | C1H9g20064 | CX9g057745 | LOC_Os09g21760 | Os09g0386400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057080 | 9:17,023,598-17,027,950 | - | C1H9g16740 | C2H9g21730 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| CX9g057446 | 9:17,032,597-17,035,727 | - | C1H9g22826 | C2H9g21730 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| CX9g057327 | 9:17,044,434-17,045,792 | + | C1H9g05421 | C2H9g10967 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| CX9g057601 | 9:17,048,309-17,054,203 | + | C1H9g29478 | C2H9g06327 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| CX9g058204 | 9:17,055,995-17,062,576 | + | C1H9g15901 | C2H9g10101 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| CX9g055855 | 9:17,068,640-17,072,390 | + | C1H9g15862 | C2H9g04957 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| CX9g058193 | 9:17,072,815-17,077,812 | - | C1H9g17965 | C2H9g14518 | LOC_Os09g33530 | Os09g0509500 | - | Detail |
| CX9g056413 | 9:17,079,943-17,082,667 | - | C1H9g04511 | C2H9g12462 | LOC_Os09g33550 | Os09g0509700 | - | Detail |
| CX9g058151 | 9:17,092,210-17,097,894 | + | C1H9g11281 | C2H9g04068 | LOC_Os09g33559 | Os09g0510200 | - | Detail |
| CX9g056462 | 9:17,107,657-17,108,628 | - | - | C2H9g26101 | LOC_Os09g27880 | Os07g0631500 | - | Detail |
| CX9g056619 | 9:17,110,622-17,112,158 | - | C1H9g15137 | C2H9g26341 | LOC_Os09g33580 | Os09g0510500 | OsBC1, OsbHLH081, OsbHLH082 | Detail |
| CX9g057001 | 9:17,118,049-17,124,920 | - | C1H9g21051 | C2H9g18076 | LOC_Os09g33600 | Os09g0510700 | - | Detail |
| CX9g056396 | 9:17,127,994-17,128,146 | - | - | - | - | Os07g0616100 | - | Detail |
| CX9g055215 | 9:17,137,400-17,142,543 | - | C1H9g03900 | C2H9g05808 | LOC_Os09g33620 | Os09g0510900 | - | Detail |
| CX9g054910 | 9:17,142,227-17,142,754 | + | C1H5g12097 | C2H5g00389 | - | Os11g0545650 | - | Detail |
| CX9g057751 | 9:17,144,583-17,150,351 | + | C1H9g13447 | C2H9g19536 | LOC_Os09g33630 | Os09g0511000 | OsCERK2, OsRLK10, OsCERK2/OsRLK10 | Detail |
| CX9g056377 | 9:17,152,507-17,153,229 | + | C1H9g24699 | C2H9g06231 | LOC_Os09g33640 | Os09g0511200 | - | Detail |
| CX9g055485 | 9:17,159,942-17,160,607 | + | C1H9g26937 | C2H9g06231 | LOC_Os09g33650 | Os09g0511300 | - | Detail |
| CX9g055613 | 9:17,164,517-17,167,752 | + | C1H9g13732 | C2H9g26021 | LOC_Os09g33670 | Os09g0511500 | - | Detail |
| CX9g055005 | 9:17,168,882-17,173,843 | - | C1H9g03686 | C2H9g15804 | LOC_Os09g33680 | Os09g0511600 | - | Detail |