| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g22158 | 5:13,986,681-13,989,787 | + | C2H5g23177 | CX5g038457 | LOC_Os05g30210 | Os05g0365200 | - | Detail |
| C1H5g22274 | 5:14,012,101-14,015,955 | - | C2H5g10476 | CX5g038613 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C1H5g14452 | 5:14,029,052-14,033,599 | - | C2H5g18448 | CX5g038142 | LOC_Os05g30220 | Os05g0365300 | - | Detail |
| C1H5g23340 | 5:14,037,074-14,039,806 | + | C2H5g26348 | CX5g040490 | LOC_Os05g30240 | Os05g0365500 | - | Detail |
| C1H5g05965 | 5:14,045,098-14,048,958 | + | C2H5g06194 | - | LOC_Os05g30250 | Os05g0365600 | - | Detail |
| C1H5g07103 | 5:14,051,629-14,055,845 | + | C2H5g19932 | - | LOC_Os05g30250 | Os05g0366000 | - | Detail |
| C1H5g06032 | 5:14,063,627-14,064,868 | + | C2H5g06194 | - | LOC_Os05g30250 | Os05g0366000 | - | Detail |
| C1H5g22626 | 5:14,066,560-14,069,518 | + | C2H5g06194 | - | LOC_Os05g30300 | Os05g0366000 | - | Detail |
| C1H5g00288 | 5:14,072,103-14,073,005 | + | C2H5g06194 | - | LOC_Os05g30320 | Os05g0366200 | - | Detail |
| C1H5g03731 | 5:14,077,566-14,080,598 | + | C2H5g29713 | - | LOC_Os05g30340 | Os05g0366300 | - | Detail |
| C1H5g19288 | 5:14,082,121-14,083,217 | - | - | - | - | - | - | Detail |
| C1H5g23717 | 5:14,088,103-14,088,480 | - | C2H1g27901 | CX4g033665 | - | - | - | Detail |
| C1H5g27352 | 5:14,088,921-14,093,985 | + | C2H5g15031 | - | LOC_Os05g30350 | Os05g0366600 | - | Detail |
| C1H5g25544 | 5:14,097,558-14,111,983 | + | C2H5g04038 | CX3g031021 | LOC_Os05g30390 | Os05g0366600 | - | Detail |
| C1H5g23019 | 5:14,112,189-14,113,871 | - | C2H5g23686 | CX5g039866 | LOC_Os05g30400 | Os05g0366900 | - | Detail |
| C1H5g29124 | 5:14,124,638-14,126,516 | - | C2H5g07643 | CX5g037938 | LOC_Os05g30720 | - | - | Detail |
| C1H5g05278 | 5:14,162,290-14,162,622 | - | C2H4g17808 | CX5g040671 | LOC_Os05g30410 | Os05g0367000 | OsPHF5A2 | Detail |
| C1H5g31214 | 5:14,165,809-14,167,782 | - | C2H5g26184 | CX5g039377 | LOC_Os05g30420 | Os05g0367100 | - | Detail |
| C1H5g00883 | 5:14,170,038-14,173,101 | - | C2H5g02529 | CX5g039616 | LOC_Os05g30430 | Os05g0367200 | - | Detail |
| C1H5g12306 | 5:14,176,946-14,180,279 | - | C2H5g17178 | CX5g039728 | LOC_Os05g30454 | Os05g0367400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057080 | 9:17,023,598-17,027,950 | - | C1H9g16740 | C2H9g21730 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| CX9g057446 | 9:17,032,597-17,035,727 | - | C1H9g22826 | C2H9g21730 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| CX9g057327 | 9:17,044,434-17,045,792 | + | C1H9g05421 | C2H9g10967 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| CX9g057601 | 9:17,048,309-17,054,203 | + | C1H9g29478 | C2H9g06327 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| CX9g058204 | 9:17,055,995-17,062,576 | + | C1H9g15901 | C2H9g10101 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| CX9g055855 | 9:17,068,640-17,072,390 | + | C1H9g15862 | C2H9g04957 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| CX9g058193 | 9:17,072,815-17,077,812 | - | C1H9g17965 | C2H9g14518 | LOC_Os09g33530 | Os09g0509500 | - | Detail |
| CX9g056413 | 9:17,079,943-17,082,667 | - | C1H9g04511 | C2H9g12462 | LOC_Os09g33550 | Os09g0509700 | - | Detail |
| CX9g058151 | 9:17,092,210-17,097,894 | + | C1H9g11281 | C2H9g04068 | LOC_Os09g33559 | Os09g0510200 | - | Detail |
| CX9g056462 | 9:17,107,657-17,108,628 | - | - | C2H9g26101 | LOC_Os09g27880 | Os07g0631500 | - | Detail |
| CX9g056619 | 9:17,110,622-17,112,158 | - | C1H9g15137 | C2H9g26341 | LOC_Os09g33580 | Os09g0510500 | OsBC1, OsbHLH081, OsbHLH082 | Detail |
| CX9g057001 | 9:17,118,049-17,124,920 | - | C1H9g21051 | C2H9g18076 | LOC_Os09g33600 | Os09g0510700 | - | Detail |
| CX9g056396 | 9:17,127,994-17,128,146 | - | - | - | - | Os07g0616100 | - | Detail |
| CX9g055215 | 9:17,137,400-17,142,543 | - | C1H9g03900 | C2H9g05808 | LOC_Os09g33620 | Os09g0510900 | - | Detail |
| CX9g054910 | 9:17,142,227-17,142,754 | + | C1H5g12097 | C2H5g00389 | - | Os11g0545650 | - | Detail |
| CX9g057751 | 9:17,144,583-17,150,351 | + | C1H9g13447 | C2H9g19536 | LOC_Os09g33630 | Os09g0511000 | OsCERK2, OsRLK10, OsCERK2/OsRLK10 | Detail |
| CX9g056377 | 9:17,152,507-17,153,229 | + | C1H9g24699 | C2H9g06231 | LOC_Os09g33640 | Os09g0511200 | - | Detail |
| CX9g055485 | 9:17,159,942-17,160,607 | + | C1H9g26937 | C2H9g06231 | LOC_Os09g33650 | Os09g0511300 | - | Detail |
| CX9g055613 | 9:17,164,517-17,167,752 | + | C1H9g13732 | C2H9g26021 | LOC_Os09g33670 | Os09g0511500 | - | Detail |
| CX9g055005 | 9:17,168,882-17,173,843 | - | C1H9g03686 | C2H9g15804 | LOC_Os09g33680 | Os09g0511600 | - | Detail |