| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16965 | 2:5,613,721-5,622,561 | + | C2H2g23090 | CX2g019450 | LOC_Os02g11820 | Os02g0208900 | - | Detail |
| C1H2g13281 | 2:5,622,936-5,632,598 | - | C2H2g04355 | CX2g023055 | LOC_Os02g11830 | Os02g0209000 | - | Detail |
| C1H2g10719 | 2:5,635,512-5,645,518 | - | C2H2g30306 | CX2g022332 | LOC_Os02g11830 | Os02g0209000 | - | Detail |
| C1H2g23805 | 2:5,652,243-5,652,500 | - | - | CX2g020232 | LOC_Os02g11859 | Os02g0209300 | - | Detail |
| C1H2g17269 | 2:5,654,621-5,655,169 | - | - | CX2g020989 | LOC_Os02g11870 | Os02g0209400 | - | Detail |
| C1H2g21598 | 2:5,658,848-5,659,164 | - | C2H2g14329 | CX2g021767 | LOC_Os02g11880 | Os02g0264800 | - | Detail |
| C1H2g08072 | 2:5,661,016-5,662,470 | - | C2H2g21557 | CX2g024347 | LOC_Os02g11890 | Os02g0209900 | - | Detail |
| C1H2g30422 | 2:5,681,334-5,681,880 | + | C2H2g05973 | - | - | - | - | Detail |
| C1H2g10982 | 2:5,683,467-5,688,927 | - | C2H2g13610 | - | - | - | - | Detail |
| C1H2g21521 | 2:5,684,520-5,687,815 | + | C2H2g11194 | CX2g019288 | LOC_Os02g11930 | Os02g0210700 | - | Detail |
| C1H2g12089 | 2:5,688,902-5,693,630 | + | C2H2g01783 | CX2g021475 | LOC_Os02g11940 | Os02g0210800 | - | Detail |
| C1H2g07700 | 2:5,695,259-5,695,825 | + | C2H2g15777 | CX2g022659 | LOC_Os02g11950 | Os02g0210900 | - | Detail |
| C1H2g21492 | 2:5,697,319-5,698,987 | + | C2H2g15779 | CX2g024455 | LOC_Os02g11960 | Os02g0211000 | - | Detail |
| C1H2g11109 | 2:5,701,803-5,704,886 | + | C2H2g17792 | CX2g024455 | LOC_Os02g11960 | Os02g0107900 | - | Detail |
| C1H2g20193 | 2:5,730,389-5,731,935 | - | C2H2g20036 | CX2g024936 | LOC_Os02g12030 | Os02g0211600 | - | Detail |
| C1H2g22254 | 2:5,756,610-5,760,126 | - | C2H2g20623 | CX2g021546 | LOC_Os02g12030 | Os02g0211800 | - | Detail |
| C1H2g15671 | 2:5,763,150-5,763,482 | + | C2H2g22748 | CX2g022648 | - | - | - | Detail |
| C1H2g15932 | 2:5,765,805-5,767,832 | - | C2H2g28701 | CX2g024892 | LOC_Os02g12040 | Os02g0211900 | - | Detail |
| C1H2g04370 | 2:5,775,390-5,775,940 | - | C2H2g04434 | CX2g018915 | LOC_Os02g12060 | Os02g0212100 | - | Detail |
| C1H2g25470 | 2:5,780,188-5,780,979 | + | C2H2g23896 | CX2g024246 | LOC_Os02g12070 | Os02g0212300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057080 | 9:17,023,598-17,027,950 | - | C1H9g16740 | C2H9g21730 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| CX9g057446 | 9:17,032,597-17,035,727 | - | C1H9g22826 | C2H9g21730 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| CX9g057327 | 9:17,044,434-17,045,792 | + | C1H9g05421 | C2H9g10967 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| CX9g057601 | 9:17,048,309-17,054,203 | + | C1H9g29478 | C2H9g06327 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| CX9g058204 | 9:17,055,995-17,062,576 | + | C1H9g15901 | C2H9g10101 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| CX9g055855 | 9:17,068,640-17,072,390 | + | C1H9g15862 | C2H9g04957 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| CX9g058193 | 9:17,072,815-17,077,812 | - | C1H9g17965 | C2H9g14518 | LOC_Os09g33530 | Os09g0509500 | - | Detail |
| CX9g056413 | 9:17,079,943-17,082,667 | - | C1H9g04511 | C2H9g12462 | LOC_Os09g33550 | Os09g0509700 | - | Detail |
| CX9g058151 | 9:17,092,210-17,097,894 | + | C1H9g11281 | C2H9g04068 | LOC_Os09g33559 | Os09g0510200 | - | Detail |
| CX9g056462 | 9:17,107,657-17,108,628 | - | - | C2H9g26101 | LOC_Os09g27880 | Os07g0631500 | - | Detail |
| CX9g056619 | 9:17,110,622-17,112,158 | - | C1H9g15137 | C2H9g26341 | LOC_Os09g33580 | Os09g0510500 | OsBC1, OsbHLH081, OsbHLH082 | Detail |
| CX9g057001 | 9:17,118,049-17,124,920 | - | C1H9g21051 | C2H9g18076 | LOC_Os09g33600 | Os09g0510700 | - | Detail |
| CX9g056396 | 9:17,127,994-17,128,146 | - | - | - | - | Os07g0616100 | - | Detail |
| CX9g055215 | 9:17,137,400-17,142,543 | - | C1H9g03900 | C2H9g05808 | LOC_Os09g33620 | Os09g0510900 | - | Detail |
| CX9g054910 | 9:17,142,227-17,142,754 | + | C1H5g12097 | C2H5g00389 | - | Os11g0545650 | - | Detail |
| CX9g057751 | 9:17,144,583-17,150,351 | + | C1H9g13447 | C2H9g19536 | LOC_Os09g33630 | Os09g0511000 | OsCERK2, OsRLK10, OsCERK2/OsRLK10 | Detail |
| CX9g056377 | 9:17,152,507-17,153,229 | + | C1H9g24699 | C2H9g06231 | LOC_Os09g33640 | Os09g0511200 | - | Detail |
| CX9g055485 | 9:17,159,942-17,160,607 | + | C1H9g26937 | C2H9g06231 | LOC_Os09g33650 | Os09g0511300 | - | Detail |
| CX9g055613 | 9:17,164,517-17,167,752 | + | C1H9g13732 | C2H9g26021 | LOC_Os09g33670 | Os09g0511500 | - | Detail |
| CX9g055005 | 9:17,168,882-17,173,843 | - | C1H9g03686 | C2H9g15804 | LOC_Os09g33680 | Os09g0511600 | - | Detail |