| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g18368 | 4:24,112,954-24,119,537 | + | C1H4g12924 | CX4g035807 | LOC_Os04g47120 | Os04g0558400 | - | Detail |
| C2H4g21310 | 4:24,120,183-24,121,299 | - | C1H4g13759 | CX4g036142 | LOC_Os04g47130 | Os04g0558500 | - | Detail |
| C2H4g01363 | 4:24,124,376-24,124,795 | - | - | CX4g035402 | LOC_Os04g47140 | Os04g0558700 | - | Detail |
| C2H4g24237 | 4:24,131,445-24,133,826 | + | C1H4g04177 | CX4g033495 | LOC_Os04g47150 | Os04g0558900 | - | Detail |
| C2H4g27313 | 4:24,140,044-24,142,332 | - | C1H4g04177 | CX4g034159 | LOC_Os04g47160 | Os04g0559000 | - | Detail |
| C2H4g22229 | 4:24,148,473-24,148,980 | + | C1H4g25980 | CX4g035913 | LOC_Os04g47170 | - | - | Detail |
| C2H4g07722 | 4:24,148,995-24,150,448 | + | C1H4g20062 | CX4g035913 | LOC_Os04g47170 | Os04g0559100 | - | Detail |
| C2H4g00730 | 4:24,150,804-24,156,748 | - | C1H4g30198 | CX4g034722 | LOC_Os04g47180 | Os04g0559200 | - | Detail |
| C2H4g15295 | 4:24,161,835-24,165,614 | - | C1H4g26769 | CX4g035770 | LOC_Os04g47190 | Os04g0559400 | - | Detail |
| C2H4g27884 | 4:24,168,013-24,168,276 | - | C1H4g01512 | - | LOC_Os04g47200 | Os04g0559550 | - | Detail |
| C2H4g24383 | 4:24,168,871-24,169,185 | - | - | - | - | - | - | Detail |
| C2H4g05213 | 4:24,173,181-24,174,965 | + | C1H4g23739 | CX4g032090 | LOC_Os04g47220 | Os04g0559700 | OsPIP1;2 | Detail |
| C2H4g27920 | 4:24,175,874-24,184,460 | - | C1H4g10381 | CX4g034281 | LOC_Os04g47240 | Os04g0559800 | SMG2, OsMKKK10, MKKK10, SMG2/OsMKKK10 | Detail |
| C2H4g27316 | 4:24,187,461-24,189,092 | - | C1H4g05653 | CX4g034878 | LOC_Os04g47250 | Os04g0560100 | - | Detail |
| C2H4g00919 | 4:24,190,780-24,192,373 | + | C1H4g01866 | CX4g032012 | LOC_Os04g47260 | Os04g0560200 | - | Detail |
| C2H4g23249 | 4:24,192,809-24,196,125 | - | C1H4g14235 | CX4g034678 | LOC_Os04g47270 | Os04g0560300 | - | Detail |
| C2H4g15141 | 4:24,196,840-24,200,036 | - | C1H4g22466 | CX4g031503 | LOC_Os04g47280 | Os04g0560400 | - | Detail |
| C2H4g28578 | 4:24,202,481-24,206,003 | + | C1H4g11646 | CX4g034744 | LOC_Os04g47290 | Os04g0560500 | - | Detail |
| C2H4g00072 | 4:24,206,485-24,209,028 | - | C1H4g00637 | CX4g033341 | LOC_Os04g47300 | Os04g0560600 | CDPK12, OsCDPK12, OsCPK12, ESL4 | Detail |
| C2H4g08768 | 4:24,212,659-24,213,852 | + | C1H4g08087 | CX4g033231 | LOC_Os04g47310 | Os04g0560700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057776 | 9:16,902,402-16,910,031 | + | C1H9g02458 | C2H9g05876 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| CX9g055241 | 9:16,911,509-16,911,679 | + | - | - | - | - | - | Detail |
| CX9g055013 | 9:16,912,691-16,915,326 | + | C1H9g22232 | C2H9g29007 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| CX9g055016 | 9:16,925,502-16,926,003 | + | - | - | - | - | - | Detail |
| CX9g055627 | 9:16,937,483-16,942,236 | + | C1H9g22572 | C2H9g16087 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| CX9g055231 | 9:16,947,087-16,947,520 | - | - | - | - | - | - | Detail |
| CX9g055656 | 9:16,950,714-16,956,741 | + | C1H9g01976 | C2H9g24094 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| CX9g056723 | 9:16,959,075-16,961,232 | + | C1H9g31066 | C2H9g09810 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| CX9g056857 | 9:16,968,363-16,968,680 | + | C1H9g29777 | C2H9g27580 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| CX9g058089 | 9:16,971,528-16,973,787 | - | C1H9g05594 | C2H9g28610 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| CX9g056931 | 9:16,975,423-16,976,772 | - | C1H9g16500 | C2H9g13596 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| CX9g056180 | 9:16,978,457-16,980,456 | - | C1H9g04875 | C2H9g15981 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| CX9g057008 | 9:16,985,410-16,985,886 | + | - | - | - | Os09g0508000 | - | Detail |
| CX9g056378 | 9:16,988,762-16,990,684 | - | C1H9g11387 | C2H9g02236 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| CX9g057787 | 9:16,991,609-16,995,545 | - | C1H9g14135 | C2H9g17381 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| CX9g057936 | 9:16,997,049-16,998,886 | - | C1H9g15525 | C2H9g06782 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| CX9g056507 | 9:17,005,108-17,006,363 | + | C1H9g29300 | C2H9g16760 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| CX9g057215 | 9:17,010,106-17,010,303 | + | - | - | - | - | - | Detail |
| CX9g056196 | 9:17,011,610-17,011,783 | - | - | - | - | - | - | Detail |
| CX9g056683 | 9:17,021,393-17,022,838 | - | C1H9g31398 | C2H9g18629 | LOC_Os09g30980 | Os09g0482900 | - | Detail |