| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02618 | 5:19,209,893-19,212,054 | - | C2H5g18071 | CX1g001859 | LOC_Os05g39960 | Os05g0477300 | - | Detail |
| C1H5g30837 | 5:19,212,462-19,214,127 | - | C2H5g02002 | CX5g039095 | - | Os05g0204600 | OsBBX14, OsDBB3b | Detail |
| C1H5g02202 | 5:19,214,514-19,218,768 | - | C2H5g14247 | CX5g038009 | LOC_Os05g39980 | Os05g0477500 | - | Detail |
| C1H5g30215 | 5:19,220,885-19,222,240 | - | C2H5g20824 | CX5g040535 | LOC_Os05g39990 | Os05g0477600 | OsEXPA4, OsEXP4 | Detail |
| C1H5g10767 | 5:19,229,853-19,230,374 | + | C2H5g15346 | CX5g040284 | LOC_Os05g40010 | Os05g0477900 | - | Detail |
| C1H5g07203 | 5:19,231,508-19,232,077 | + | C2H5g20467 | CX5g041113 | LOC_Os05g40020 | Os05g0478000 | - | Detail |
| C1H5g10010 | 5:19,236,202-19,240,443 | + | C2H5g12806 | CX5g040411 | LOC_Os05g40040 | Os05g0478200 | - | Detail |
| C1H5g00196 | 5:19,244,069-19,247,664 | + | C2H5g01765 | CX5g038363 | LOC_Os05g40050 | Os05g0478300 | - | Detail |
| C1H5g12837 | 5:19,256,829-19,259,414 | - | C2H5g08495 | CX5g037318 | LOC_Os05g40070 | Os05g0478700 | - | Detail |
| C1H5g11113 | 5:19,267,520-19,268,612 | - | C2H5g25461 | CX5g037363 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| C1H5g26849 | 5:19,274,692-19,275,736 | - | C2H5g10570 | CX5g037363 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| C1H5g24241 | 5:19,289,281-19,289,553 | - | C2H5g08801 | CX5g039436 | LOC_Os05g40150 | Os05g0479700 | - | Detail |
| C1H5g06063 | 5:19,291,970-19,294,501 | - | C2H5g08801 | CX5g039436 | LOC_Os05g40150 | Os05g0479700 | - | Detail |
| C1H5g29758 | 5:19,296,689-19,299,292 | + | C2H5g20369 | - | LOC_Os05g40160 | Os05g0479800 | - | Detail |
| C1H5g04289 | 5:19,302,735-19,303,849 | - | C2H5g10573 | CX5g040657 | LOC_Os05g40170 | Os05g0479900 | - | Detail |
| C1H5g15872 | 5:19,305,798-19,308,870 | + | C2H5g25386 | CX5g038549 | LOC_Os05g40180 | Os05g0480000 | - | Detail |
| C1H5g28899 | 5:19,309,029-19,309,840 | - | C2H5g29302 | CX5g040025 | LOC_Os05g40190 | Os05g0480200 | - | Detail |
| C1H5g23691 | 5:19,311,773-19,317,010 | - | C2H5g01124 | CX5g039013 | LOC_Os05g40200 | Os05g0480400 | - | Detail |
| C1H5g19892 | 5:19,328,890-19,333,156 | - | C2H5g07858 | CX5g037523 | LOC_Os05g40220 | Os05g0480600 | - | Detail |
| C1H5g06303 | 5:19,338,827-19,340,315 | + | C2H5g15641 | CX5g037415 | LOC_Os05g40230 | Os05g0480700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057776 | 9:16,902,402-16,910,031 | + | C1H9g02458 | C2H9g05876 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| CX9g055241 | 9:16,911,509-16,911,679 | + | - | - | - | - | - | Detail |
| CX9g055013 | 9:16,912,691-16,915,326 | + | C1H9g22232 | C2H9g29007 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| CX9g055016 | 9:16,925,502-16,926,003 | + | - | - | - | - | - | Detail |
| CX9g055627 | 9:16,937,483-16,942,236 | + | C1H9g22572 | C2H9g16087 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| CX9g055231 | 9:16,947,087-16,947,520 | - | - | - | - | - | - | Detail |
| CX9g055656 | 9:16,950,714-16,956,741 | + | C1H9g01976 | C2H9g24094 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| CX9g056723 | 9:16,959,075-16,961,232 | + | C1H9g31066 | C2H9g09810 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| CX9g056857 | 9:16,968,363-16,968,680 | + | C1H9g29777 | C2H9g27580 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| CX9g058089 | 9:16,971,528-16,973,787 | - | C1H9g05594 | C2H9g28610 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| CX9g056931 | 9:16,975,423-16,976,772 | - | C1H9g16500 | C2H9g13596 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| CX9g056180 | 9:16,978,457-16,980,456 | - | C1H9g04875 | C2H9g15981 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| CX9g057008 | 9:16,985,410-16,985,886 | + | - | - | - | Os09g0508000 | - | Detail |
| CX9g056378 | 9:16,988,762-16,990,684 | - | C1H9g11387 | C2H9g02236 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| CX9g057787 | 9:16,991,609-16,995,545 | - | C1H9g14135 | C2H9g17381 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| CX9g057936 | 9:16,997,049-16,998,886 | - | C1H9g15525 | C2H9g06782 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| CX9g056507 | 9:17,005,108-17,006,363 | + | C1H9g29300 | C2H9g16760 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| CX9g057215 | 9:17,010,106-17,010,303 | + | - | - | - | - | - | Detail |
| CX9g056196 | 9:17,011,610-17,011,783 | - | - | - | - | - | - | Detail |
| CX9g056683 | 9:17,021,393-17,022,838 | - | C1H9g31398 | C2H9g18629 | LOC_Os09g30980 | Os09g0482900 | - | Detail |