| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29598 | 9:9,987,154-9,992,163 | + | C2H9g06733 | CX9g057137 | LOC_Os09g19830 | Os09g0362900 | - | Detail |
| C1H9g06456 | 9:9,998,582-10,003,189 | + | C2H9g18853 | CX9g055594 | LOC_Os09g19850 | Os09g0363100 | AL2 | Detail |
| C1H9g17470 | 9:10,003,276-10,009,703 | + | C2H9g21274 | CX9g054946 | LOC_Os09g19880 | Os09g0363400 | - | Detail |
| C1H9g09576 | 9:10,011,993-10,015,658 | + | C2H9g19173 | CX9g055913 | LOC_Os09g19890 | Os09g0363500 | - | Detail |
| C1H9g19156 | 9:10,017,106-10,020,441 | - | C2H9g30170 | CX9g056843 | LOC_Os09g19900 | Os09g0363600 | - | Detail |
| C1H9g05940 | 9:10,021,808-10,023,145 | - | C2H9g24242 | CX9g056665 | LOC_Os09g19910 | Os09g0363700 | - | Detail |
| C1H9g13676 | 9:10,024,239-10,027,965 | + | C2H9g24130 | CX9g057760 | LOC_Os09g19920 | Os09g0363800 | - | Detail |
| C1H9g20675 | 9:10,027,843-10,034,266 | - | C2H9g06894 | CX9g055111 | LOC_Os09g19930 | Os09g0363900 | ONI3 | Detail |
| C1H9g06801 | 9:10,045,482-10,047,298 | + | C2H9g24304 | CX9g058154 | LOC_Os09g19940 | Os09g0364000 | - | Detail |
| C1H9g25007 | 9:10,050,355-10,051,461 | + | - | CX9g055190 | LOC_Os09g19950 | Os09g0364100 | - | Detail |
| C1H9g15961 | 9:10,057,125-10,057,901 | + | - | CX9g055904 | LOC_Os09g19970 | Os09g0364400 | - | Detail |
| C1H9g01896 | 9:10,059,074-10,062,091 | + | C2H9g26597 | CX9g055401 | LOC_Os09g19980 | Os09g0364500 | - | Detail |
| C1H9g22808 | 9:10,072,217-10,073,287 | + | C2H9g05953 | CX9g055642 | LOC_Os09g20000 | Os09g0364800 | - | Detail |
| C1H9g18906 | 9:10,085,555-10,086,658 | + | C2H9g17518 | CX9g054992 | LOC_Os09g20010 | Os09g0364900 | - | Detail |
| C1H9g09897 | 9:10,127,643-10,132,263 | - | C2H9g05844 | CX9g055654 | LOC_Os09g20090 | Os09g0365900 | OsORAP1, OsAAO4 | Detail |
| C1H9g15571 | 9:10,216,321-10,217,602 | - | C2H9g09091 | CX9g054852 | LOC_Os09g20200 | - | - | Detail |
| C1H9g30784 | 9:10,228,975-10,229,292 | + | - | - | - | - | - | Detail |
| C1H9g02207 | 9:10,229,355-10,229,974 | + | C2H9g29920 | CX9g056871 | LOC_Os09g20240 | Os09g0367900 | - | Detail |
| C1H9g30662 | 9:10,249,689-10,251,212 | - | C2H9g28312 | CX9g056709 | LOC_Os09g20260 | Os09g0368200 | - | Detail |
| C1H9g08171 | 9:10,253,525-10,254,719 | - | C2H9g01995 | CX9g056709 | LOC_Os09g20284 | Os09g0368200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g057776 | 9:16,902,402-16,910,031 | + | C1H9g02458 | C2H9g05876 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| CX9g055241 | 9:16,911,509-16,911,679 | + | - | - | - | - | - | Detail |
| CX9g055013 | 9:16,912,691-16,915,326 | + | C1H9g22232 | C2H9g29007 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| CX9g055016 | 9:16,925,502-16,926,003 | + | - | - | - | - | - | Detail |
| CX9g055627 | 9:16,937,483-16,942,236 | + | C1H9g22572 | C2H9g16087 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| CX9g055231 | 9:16,947,087-16,947,520 | - | - | - | - | - | - | Detail |
| CX9g055656 | 9:16,950,714-16,956,741 | + | C1H9g01976 | C2H9g24094 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| CX9g056723 | 9:16,959,075-16,961,232 | + | C1H9g31066 | C2H9g09810 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| CX9g056857 | 9:16,968,363-16,968,680 | + | C1H9g29777 | C2H9g27580 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| CX9g058089 | 9:16,971,528-16,973,787 | - | C1H9g05594 | C2H9g28610 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| CX9g056931 | 9:16,975,423-16,976,772 | - | C1H9g16500 | C2H9g13596 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| CX9g056180 | 9:16,978,457-16,980,456 | - | C1H9g04875 | C2H9g15981 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| CX9g057008 | 9:16,985,410-16,985,886 | + | - | - | - | Os09g0508000 | - | Detail |
| CX9g056378 | 9:16,988,762-16,990,684 | - | C1H9g11387 | C2H9g02236 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| CX9g057787 | 9:16,991,609-16,995,545 | - | C1H9g14135 | C2H9g17381 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| CX9g057936 | 9:16,997,049-16,998,886 | - | C1H9g15525 | C2H9g06782 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| CX9g056507 | 9:17,005,108-17,006,363 | + | C1H9g29300 | C2H9g16760 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| CX9g057215 | 9:17,010,106-17,010,303 | + | - | - | - | - | - | Detail |
| CX9g056196 | 9:17,011,610-17,011,783 | - | - | - | - | - | - | Detail |
| CX9g056683 | 9:17,021,393-17,022,838 | - | C1H9g31398 | C2H9g18629 | LOC_Os09g30980 | Os09g0482900 | - | Detail |