| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055341 | 9:16,752,629-16,758,890 | - | C1H9g19163 | C2H9g09324 | LOC_Os09g32580 | Os09g0502800 | - | Detail |
| CX9g055636 | 9:16,767,078-16,768,412 | + | C1H9g27895 | C2H9g03067 | LOC_Os09g32620 | Os09g0503000 | - | Detail |
| CX9g058014 | 9:16,770,719-16,773,208 | + | C1H9g22567 | C2H9g26652 | LOC_Os09g32640 | Os09g0503100 | - | Detail |
| CX9g055869 | 9:16,775,584-16,778,871 | + | C1H9g12902 | C2H9g20718 | LOC_Os09g32650 | Os09g0503400 | - | Detail |
| CX9g055931 | 9:16,800,659-16,802,206 | + | - | - | - | - | - | Detail |
| CX9g057796 | 9:16,810,683-16,810,919 | - | - | - | - | - | - | Detail |
| CX9g056666 | 9:16,812,857-16,816,698 | + | C1H9g15461 | C2H9g28585 | LOC_Os09g32680 | Os09g0504400 | OsCycC | Detail |
| CX9g055615 | 9:16,819,048-16,820,060 | - | C1H9g24869 | C2H9g18502 | LOC_Os09g32690 | Os09g0504700 | - | Detail |
| CX9g055065 | 9:16,821,176-16,822,970 | + | C1H9g01645 | C2H9g07035 | LOC_Os09g32700 | Os09g0504800 | - | Detail |
| CX9g057729 | 9:16,823,589-16,826,632 | - | C1H9g24207 | C2H9g25198 | LOC_Os09g32710 | Os09g0504900 | - | Detail |
| CX9g056602 | 9:16,830,983-16,831,615 | - | C1H9g05583 | - | LOC_Os09g32730 | Os09g0505000 | - | Detail |
| CX9g056102 | 9:16,834,028-16,838,604 | - | C1H9g18162 | C2H9g10527 | LOC_Os09g32740 | Os09g0505100 | OsLMP1 | Detail |
| CX9g056649 | 9:16,846,852-16,850,416 | + | C1H9g22641 | C2H9g09607 | LOC_Os09g32750 | Os09g0505200 | - | Detail |
| CX9g055713 | 9:16,851,931-16,855,239 | - | C1H9g03482 | C2H9g21366 | LOC_Os09g32760 | Os09g0505300 | - | Detail |
| CX9g056695 | 9:16,859,135-16,861,786 | - | C1H9g24687 | C2H9g12699 | LOC_Os09g32770 | Os09g0505400 | - | Detail |
| CX9g056682 | 9:16,865,216-16,868,293 | + | C1H9g26041 | C2H9g11822 | LOC_Os09g32800 | Os09g0505600 | - | Detail |
| CX9g057981 | 9:16,871,239-16,873,574 | + | - | C2H9g18360 | LOC_Os09g32810 | Os09g0505700 | - | Detail |
| CX9g056458 | 9:16,874,860-16,879,886 | + | C1H9g21392 | C2H9g24671 | LOC_Os09g32820 | Os09g0505800 | - | Detail |
| CX9g057123 | 9:16,882,068-16,885,576 | + | C1H9g14148 | C2H9g08120 | LOC_Os09g32830 | Os09g0505900 | - | Detail |
| CX9g056383 | 9:16,886,160-16,890,358 | - | C1H9g17584 | C2H9g17089 | LOC_Os09g32840 | Os09g0506000 | - | Detail |