| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02801 | 1:22,781,895-22,783,760 | + | C1H1g02990 | CX1g003750 | LOC_Os01g44360 | Os01g0634900 | - | Detail |
| C2H1g14029 | 1:22,800,599-22,804,042 | + | C1H1g03527 | CX1g001073 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g03825 | 1:22,806,305-22,807,773 | + | C1H1g07657 | CX8g052292 | LOC_Os01g44394 | Os01g0635400 | - | Detail |
| C2H1g05065 | 1:22,812,063-22,818,989 | - | C1H1g22176 | CX1g000646 | LOC_Os01g44430 | Os01g0635600 | - | Detail |
| C2H1g18946 | 1:22,832,565-22,835,056 | - | C1H1g27414 | CX1g003935 | LOC_Os01g44960 | Os01g0636400 | - | Detail |
| C2H1g07403 | 1:22,844,565-22,848,440 | + | C1H1g00331 | CX1g001605 | LOC_Os01g44970 | Os01g0636500 | - | Detail |
| C2H1g02176 | 1:22,850,866-22,853,732 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g26854 | 1:22,854,799-22,862,607 | - | C1H1g21121 | CX1g006855 | LOC_Os01g44990 | Os01g0636700 | OsCHR745, CHR745 | Detail |
| C2H1g21987 | 1:22,872,357-22,877,333 | - | C1H1g23587 | CX1g002420 | LOC_Os01g45020 | Os01g0637100 | - | Detail |
| C2H1g25141 | 1:22,894,595-22,896,402 | - | - | CX1g003226 | LOC_Os01g45040 | Os01g0637300 | - | Detail |
| C2H1g19088 | 1:22,902,539-22,906,552 | + | C1H1g00331 | CX1g001605 | LOC_Os01g45060 | Os01g0637500 | OsPG3 | Detail |
| C2H1g22263 | 1:22,908,608-22,911,930 | - | C1H1g13180 | CX1g007252 | LOC_Os01g44980 | Os01g0637600 | OsPDF1B | Detail |
| C2H1g15078 | 1:22,915,510-22,916,308 | + | C1H1g21245 | CX1g000311 | LOC_Os01g45090 | Os01g0637800 | OsMYB305 | Detail |
| C2H1g07012 | 1:22,958,679-22,959,299 | + | C1H1g25999 | CX1g003479 | LOC_Os01g45160 | Os01g0638800 | - | Detail |
| C2H1g28691 | 1:22,969,162-22,972,367 | + | C1H1g28061 | CX1g000740 | LOC_Os01g45190 | Os01g0639100 | OsRH2 | Detail |
| C2H1g30211 | 1:22,973,098-22,976,456 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g06985 | 1:22,978,466-22,979,033 | - | C1H1g08315 | CX1g002505 | LOC_Os01g45200 | Os01g0639200 | Snl6 | Detail |
| C2H1g17536 | 1:23,015,736-23,024,618 | + | C1H1g11479 | CX1g002383 | LOC_Os01g45274 | Os01g0639900 | BETACA1, OsβCA1, OsbCA1 | Detail |
| C2H1g27294 | 1:23,027,541-23,031,034 | + | C1H1g17843 | CX1g007210 | LOC_Os01g45290 | Os01g0640000 | - | Detail |
| C2H1g21978 | 1:23,032,721-23,038,389 | - | C1H1g22957 | CX1g000695 | LOC_Os01g45320 | Os01g0640200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056866 | 9:16,628,147-16,629,867 | - | C1H9g07123 | C2H9g30289 | LOC_Os09g32330 | Os09g0499000 | SKIN1 | Detail |
| CX9g057294 | 9:16,639,676-16,639,849 | + | - | - | - | - | - | Detail |
| CX9g055693 | 9:16,653,625-16,654,746 | - | C1H9g27912 | - | LOC_Os09g32360 | Os09g0499400 | - | Detail |
| CX9g057337 | 9:16,656,705-16,658,852 | + | C1H9g27371 | - | LOC_Os09g32370 | Os09g0499500 | - | Detail |
| CX9g056637 | 9:16,659,783-16,663,011 | - | C1H9g11515 | C2H9g15486 | LOC_Os09g32380 | Os09g0499600 | - | Detail |
| CX9g055955 | 9:16,664,842-16,671,166 | - | C1H9g03497 | C2H9g30463 | LOC_Os09g32410 | Os09g0500100 | - | Detail |
| CX9g055770 | 9:16,671,662-16,672,165 | - | C1H9g18383 | - | - | Os09g0500151 | - | Detail |
| CX9g057000 | 9:16,674,488-16,677,150 | - | C1H9g08634 | C2H9g09805 | LOC_Os09g32430 | Os09g0500200 | - | Detail |
| CX9g056675 | 9:16,679,420-16,684,629 | + | C1H9g11307 | C2H9g15110 | LOC_Os09g32440 | Os09g0500300 | - | Detail |
| CX9g054850 | 9:16,685,658-16,693,477 | + | C1H9g04482 | C2H9g01534 | LOC_Os09g32450 | Os09g0500600 | - | Detail |
| CX9g057355 | 9:16,695,862-16,697,882 | - | C1H9g28494 | C2H9g04091 | LOC_Os09g32470 | Os09g0500900 | - | Detail |
| CX9g057555 | 9:16,704,469-16,705,263 | + | C1H9g04226 | C2H9g04091 | LOC_Os09g32470 | Os09g0501100 | - | Detail |
| CX9g056949 | 9:16,708,122-16,709,804 | + | C1H9g28322 | C2H9g21146 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g056092 | 9:16,715,829-16,717,581 | - | C1H9g06581 | C2H9g26241 | LOC_Os09g32510 | Os09g0501600 | OsbHLH92, Lam1 | Detail |
| CX9g057819 | 9:16,722,740-16,723,938 | - | C1H9g28322 | C2H9g30383 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g054899 | 9:16,725,043-16,727,335 | - | C1H9g00140 | C2H9g27344 | LOC_Os09g32526 | Os09g0501850 | - | Detail |
| CX9g055348 | 9:16,728,578-16,730,327 | - | C1H9g28322 | C2H9g30383 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g055824 | 9:16,733,557-16,739,117 | - | C1H9g08567 | C2H9g09975 | LOC_Os09g32540 | Os09g0502100 | LGD1, LGD1.6 | Detail |
| CX9g056540 | 9:16,742,603-16,747,075 | - | C1H9g16225 | C2H9g02889 | LOC_Os09g32550 | Os09g0502200 | - | Detail |
| CX9g054956 | 9:16,750,431-16,751,763 | + | C1H9g10007 | C2H9g24651 | LOC_Os09g32570 | Os09g0502500 | - | Detail |