| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g12548 | 4:29,870,782-29,873,701 | - | C2H4g22497 | CX4g036015 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| C1H4g28067 | 4:29,874,706-29,880,746 | + | C2H4g29038 | CX4g033656 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| C1H4g24932 | 4:29,889,703-29,891,698 | - | C2H4g16367 | CX4g035876 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| C1H4g07972 | 4:29,895,898-29,897,966 | - | C2H4g09789 | CX4g035340 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| C1H4g22743 | 4:29,898,781-29,902,244 | - | C2H4g30313 | CX4g036253 | LOC_Os04g57550 | Os04g0671200 | - | Detail |
| C1H4g10516 | 4:29,903,190-29,907,373 | - | C2H4g09887 | CX4g034946 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| C1H4g18642 | 4:29,914,984-29,917,878 | - | C2H4g11022 | CX4g034217 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| C1H4g10863 | 4:29,919,853-29,923,225 | - | C2H4g26599 | CX4g034187 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| C1H4g29876 | 4:29,925,187-29,932,498 | - | C2H4g28020 | CX4g036532 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| C1H4g03758 | 4:29,946,857-29,949,895 | - | C2H4g22256 | CX4g032181 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| C1H4g28972 | 4:29,961,894-29,967,859 | - | C2H4g16737 | CX4g031927 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| C1H4g18744 | 4:29,969,283-29,973,110 | - | C2H4g14699 | CX4g031948 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| C1H4g12099 | 4:29,979,174-29,981,416 | - | C2H4g22256 | CX4g032181 | LOC_Os04g57660 | Os04g0672600 | - | Detail |
| C1H4g02898 | 4:29,987,329-29,990,623 | + | C2H4g13935 | CX4g031387 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| C1H4g21333 | 4:29,991,614-29,994,014 | + | C2H4g25125 | CX4g034255 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| C1H4g29753 | 4:29,995,710-30,000,759 | - | C2H4g28032 | CX4g032895 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| C1H4g17441 | 4:30,023,341-30,023,957 | + | C2H4g17256 | CX4g036002 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| C1H4g06545 | 4:30,030,545-30,034,430 | - | C2H4g16666 | CX4g033276 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| C1H4g12522 | 4:30,037,329-30,037,956 | - | C2H4g21541 | CX4g032931 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| C1H4g09977 | 4:30,039,911-30,040,867 | - | C2H4g03386 | - | LOC_Os04g57760 | Os04g0674000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056866 | 9:16,628,147-16,629,867 | - | C1H9g07123 | C2H9g30289 | LOC_Os09g32330 | Os09g0499000 | SKIN1 | Detail |
| CX9g057294 | 9:16,639,676-16,639,849 | + | - | - | - | - | - | Detail |
| CX9g055693 | 9:16,653,625-16,654,746 | - | C1H9g27912 | - | LOC_Os09g32360 | Os09g0499400 | - | Detail |
| CX9g057337 | 9:16,656,705-16,658,852 | + | C1H9g27371 | - | LOC_Os09g32370 | Os09g0499500 | - | Detail |
| CX9g056637 | 9:16,659,783-16,663,011 | - | C1H9g11515 | C2H9g15486 | LOC_Os09g32380 | Os09g0499600 | - | Detail |
| CX9g055955 | 9:16,664,842-16,671,166 | - | C1H9g03497 | C2H9g30463 | LOC_Os09g32410 | Os09g0500100 | - | Detail |
| CX9g055770 | 9:16,671,662-16,672,165 | - | C1H9g18383 | - | - | Os09g0500151 | - | Detail |
| CX9g057000 | 9:16,674,488-16,677,150 | - | C1H9g08634 | C2H9g09805 | LOC_Os09g32430 | Os09g0500200 | - | Detail |
| CX9g056675 | 9:16,679,420-16,684,629 | + | C1H9g11307 | C2H9g15110 | LOC_Os09g32440 | Os09g0500300 | - | Detail |
| CX9g054850 | 9:16,685,658-16,693,477 | + | C1H9g04482 | C2H9g01534 | LOC_Os09g32450 | Os09g0500600 | - | Detail |
| CX9g057355 | 9:16,695,862-16,697,882 | - | C1H9g28494 | C2H9g04091 | LOC_Os09g32470 | Os09g0500900 | - | Detail |
| CX9g057555 | 9:16,704,469-16,705,263 | + | C1H9g04226 | C2H9g04091 | LOC_Os09g32470 | Os09g0501100 | - | Detail |
| CX9g056949 | 9:16,708,122-16,709,804 | + | C1H9g28322 | C2H9g21146 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g056092 | 9:16,715,829-16,717,581 | - | C1H9g06581 | C2H9g26241 | LOC_Os09g32510 | Os09g0501600 | OsbHLH92, Lam1 | Detail |
| CX9g057819 | 9:16,722,740-16,723,938 | - | C1H9g28322 | C2H9g30383 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g054899 | 9:16,725,043-16,727,335 | - | C1H9g00140 | C2H9g27344 | LOC_Os09g32526 | Os09g0501850 | - | Detail |
| CX9g055348 | 9:16,728,578-16,730,327 | - | C1H9g28322 | C2H9g30383 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g055824 | 9:16,733,557-16,739,117 | - | C1H9g08567 | C2H9g09975 | LOC_Os09g32540 | Os09g0502100 | LGD1, LGD1.6 | Detail |
| CX9g056540 | 9:16,742,603-16,747,075 | - | C1H9g16225 | C2H9g02889 | LOC_Os09g32550 | Os09g0502200 | - | Detail |
| CX9g054956 | 9:16,750,431-16,751,763 | + | C1H9g10007 | C2H9g24651 | LOC_Os09g32570 | Os09g0502500 | - | Detail |