| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g02505 | 6:23,805,208-23,808,332 | + | C2H6g14833 | CX6g045983 | LOC_Os06g45410 | Os06g0664800 | - | Detail |
| C1H6g05921 | 6:23,811,496-23,812,391 | + | C2H6g14833 | CX6g045983 | LOC_Os06g45420 | Os06g0664900 | - | Detail |
| C1H6g15108 | 6:23,814,443-23,817,974 | + | C2H6g00067 | CX6g041356 | LOC_Os06g45430 | Os06g0665000 | - | Detail |
| C1H6g06152 | 6:23,818,216-23,820,012 | - | C2H6g17880 | CX6g041675 | LOC_Os06g45440 | Os06g0665100 | - | Detail |
| C1H6g22830 | 6:23,821,406-23,822,652 | - | C2H6g03277 | CX6g045958 | LOC_Os06g45450 | Os06g0665200 | - | Detail |
| C1H6g16253 | 6:23,828,480-23,830,730 | - | C2H6g02226 | CX6g045292 | LOC_Os06g45460 | Os06g0665400 | APO1, apo1(t), apo1, SCM2, SCM2/APO1, OsFbox321, Os_F0393 | Detail |
| C1H6g09339 | 6:23,841,125-23,845,351 | - | C2H6g26324 | CX6g042079 | LOC_Os06g45480 | Os06g0665500 | OsAAH | Detail |
| C1H6g29065 | 6:23,857,926-23,863,939 | - | C2H6g03492 | CX6g045639 | LOC_Os06g45500 | Os06g0665800 | HMA9, OsHMA9 ,oshma9-1, oshma9-2, HMA9 | Detail |
| C1H6g18112 | 6:23,869,494-23,871,887 | + | C2H6g11562 | CX6g045580 | LOC_Os06g45510 | Os06g0665900 | - | Detail |
| C1H6g21015 | 6:23,886,082-23,889,910 | + | C2H6g00145 | CX6g042910 | LOC_Os06g45540 | Os06g0666100 | SG6, GL6 | Detail |
| C1H6g24164 | 6:23,914,434-23,915,075 | + | - | CX6g042900 | LOC_Os06g45570 | Os06g0666400 | OsVQ25 | Detail |
| C1H6g09228 | 6:23,918,570-23,919,115 | + | C2H6g24158 | CX6g041424 | LOC_Os06g45580 | Os06g0666500 | - | Detail |
| C1H6g25662 | 6:23,921,637-23,925,360 | - | C2H6g07620 | CX6g043004 | LOC_Os06g45590 | Os06g0666600 | - | Detail |
| C1H6g20256 | 6:23,929,108-23,929,899 | + | - | CX6g045463 | LOC_Os06g45600 | - | - | Detail |
| C1H6g24049 | 6:23,940,235-23,940,543 | + | - | CX6g043314 | LOC_Os06g45610 | Os06g0666800 | - | Detail |
| C1H6g24780 | 6:23,942,548-23,943,519 | - | - | - | - | - | - | Detail |
| C1H6g10238 | 6:23,943,737-23,945,871 | - | C2H6g17606 | CX6g042443 | LOC_Os06g45620 | - | - | Detail |
| C1H6g29045 | 6:23,959,445-23,962,624 | + | C2H6g09505 | CX6g042136 | LOC_Os06g45630 | Os06g0667000 | - | Detail |
| C1H6g16433 | 6:23,968,678-23,969,430 | + | C2H2g02842 | CX6g043046 | LOC_Os06g45640 | Os06g0667100 | OsNF-YC4, HAP5B | Detail |
| C1H6g30018 | 6:23,974,989-23,975,201 | + | C2H6g26041 | CX6g045638 | LOC_Os06g45650 | Os06g0667200 | MADS30, OsMADS30 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056866 | 9:16,628,147-16,629,867 | - | C1H9g07123 | C2H9g30289 | LOC_Os09g32330 | Os09g0499000 | SKIN1 | Detail |
| CX9g057294 | 9:16,639,676-16,639,849 | + | - | - | - | - | - | Detail |
| CX9g055693 | 9:16,653,625-16,654,746 | - | C1H9g27912 | - | LOC_Os09g32360 | Os09g0499400 | - | Detail |
| CX9g057337 | 9:16,656,705-16,658,852 | + | C1H9g27371 | - | LOC_Os09g32370 | Os09g0499500 | - | Detail |
| CX9g056637 | 9:16,659,783-16,663,011 | - | C1H9g11515 | C2H9g15486 | LOC_Os09g32380 | Os09g0499600 | - | Detail |
| CX9g055955 | 9:16,664,842-16,671,166 | - | C1H9g03497 | C2H9g30463 | LOC_Os09g32410 | Os09g0500100 | - | Detail |
| CX9g055770 | 9:16,671,662-16,672,165 | - | C1H9g18383 | - | - | Os09g0500151 | - | Detail |
| CX9g057000 | 9:16,674,488-16,677,150 | - | C1H9g08634 | C2H9g09805 | LOC_Os09g32430 | Os09g0500200 | - | Detail |
| CX9g056675 | 9:16,679,420-16,684,629 | + | C1H9g11307 | C2H9g15110 | LOC_Os09g32440 | Os09g0500300 | - | Detail |
| CX9g054850 | 9:16,685,658-16,693,477 | + | C1H9g04482 | C2H9g01534 | LOC_Os09g32450 | Os09g0500600 | - | Detail |
| CX9g057355 | 9:16,695,862-16,697,882 | - | C1H9g28494 | C2H9g04091 | LOC_Os09g32470 | Os09g0500900 | - | Detail |
| CX9g057555 | 9:16,704,469-16,705,263 | + | C1H9g04226 | C2H9g04091 | LOC_Os09g32470 | Os09g0501100 | - | Detail |
| CX9g056949 | 9:16,708,122-16,709,804 | + | C1H9g28322 | C2H9g21146 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g056092 | 9:16,715,829-16,717,581 | - | C1H9g06581 | C2H9g26241 | LOC_Os09g32510 | Os09g0501600 | OsbHLH92, Lam1 | Detail |
| CX9g057819 | 9:16,722,740-16,723,938 | - | C1H9g28322 | C2H9g30383 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g054899 | 9:16,725,043-16,727,335 | - | C1H9g00140 | C2H9g27344 | LOC_Os09g32526 | Os09g0501850 | - | Detail |
| CX9g055348 | 9:16,728,578-16,730,327 | - | C1H9g28322 | C2H9g30383 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| CX9g055824 | 9:16,733,557-16,739,117 | - | C1H9g08567 | C2H9g09975 | LOC_Os09g32540 | Os09g0502100 | LGD1, LGD1.6 | Detail |
| CX9g056540 | 9:16,742,603-16,747,075 | - | C1H9g16225 | C2H9g02889 | LOC_Os09g32550 | Os09g0502200 | - | Detail |
| CX9g054956 | 9:16,750,431-16,751,763 | + | C1H9g10007 | C2H9g24651 | LOC_Os09g32570 | Os09g0502500 | - | Detail |