| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055571 | 9:16,441,387-16,441,617 | - | - | - | - | - | - | Detail |
| CX9g055004 | 9:16,443,374-16,443,676 | - | C1H9g21323 | - | - | - | - | Detail |
| CX9g056211 | 9:16,460,758-16,461,904 | + | C1H9g21461 | C2H9g06284 | LOC_Os09g32080 | Os09g0494200 | - | Detail |
| CX9g055749 | 9:16,463,306-16,469,184 | - | C1H9g30695 | C2H9g13819 | LOC_Os09g32090 | Os09g0494300 | - | Detail |
| CX9g056184 | 9:16,470,723-16,471,977 | - | C1H9g30695 | C2H9g17609 | LOC_Os09g32095 | Os09g0494500 | - | Detail |
| CX9g055684 | 9:16,481,365-16,482,248 | + | C1H9g23333 | C2H9g28084 | LOC_Os09g32100 | Os09g0494600 | - | Detail |
| CX9g057501 | 9:16,495,363-16,496,180 | + | C1H9g23607 | C2H9g01877 | LOC_Os09g32130 | Os09g0495200 | - | Detail |
| CX9g056833 | 9:16,513,076-16,529,090 | - | C1H9g27066 | C2H9g20254 | LOC_Os09g32190 | - | - | Detail |
| CX9g055861 | 9:16,530,435-16,530,991 | - | - | - | - | - | - | Detail |
| CX9g057081 | 9:16,533,140-16,536,558 | + | C1H9g12464 | C2H9g26296 | LOC_Os09g32200 | Os09g0497000 | - | Detail |
| CX9g057765 | 9:16,537,413-16,543,549 | - | C1H9g25295 | C2H9g25859 | LOC_Os09g32210 | Os09g0497100 | - | Detail |
| CX9g057091 | 9:16,551,369-16,554,494 | + | C1H9g25234 | C2H9g14438 | LOC_Os09g32220 | Os09g0497400 | - | Detail |
| CX9g057517 | 9:16,555,850-16,557,080 | - | C1H9g26761 | C2H9g21196 | LOC_Os09g32230 | Os09g0497500 | - | Detail |
| CX9g056012 | 9:16,557,732-16,559,824 | - | C1H9g00983 | C2H9g13913 | LOC_Os09g32240 | Os09g0497600 | - | Detail |
| CX9g056422 | 9:16,571,845-16,573,999 | - | C1H9g16261 | C2H9g12425 | LOC_Os09g32260 | Os09g0497900 | - | Detail |
| CX9g056761 | 9:16,585,789-16,587,278 | + | C1H9g12304 | C2H9g18115 | LOC_Os09g32274 | Os09g0498100 | - | Detail |
| CX9g056940 | 9:16,588,591-16,590,388 | + | C1H9g02324 | C2H9g13213 | LOC_Os09g32280 | Os09g0536300 | - | Detail |
| CX9g056176 | 9:16,592,692-16,595,997 | - | C1H9g17137 | C2H9g22570 | LOC_Os09g32290 | Os09g0498500 | - | Detail |
| CX9g054996 | 9:16,609,350-16,614,247 | + | C1H9g16410 | C2H9g18137 | LOC_Os09g32300 | Os09g0498600 | - | Detail |
| CX9g056161 | 9:16,615,834-16,618,745 | - | C1H9g27030 | C2H9g23983 | LOC_Os09g32320 | Os09g0498800 | - | Detail |