| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g12947 | 2:24,233,161-24,234,705 | + | C1H2g17222 | CX2g024545 | LOC_Os02g43150 | Os02g0645600 | - | Detail |
| C2H2g06445 | 2:24,233,462-24,234,668 | - | - | - | - | - | - | Detail |
| C2H2g19622 | 2:24,259,273-24,260,767 | + | C1H2g19085 | CX2g024814 | LOC_Os02g43170 | Os02g0646200 | - | Detail |
| C2H2g11300 | 2:24,263,567-24,265,648 | + | C1H2g22786 | CX2g024271 | LOC_Os02g43180 | Os02g0646400 | - | Detail |
| C2H2g09061 | 2:24,266,639-24,273,222 | - | C1H2g07582 | CX2g020293 | LOC_Os02g43194 | Os02g0646500 | - | Detail |
| C2H2g19522 | 2:24,279,488-24,279,739 | + | - | CX1g001923 | - | - | - | Detail |
| C2H2g08863 | 2:24,284,183-24,286,281 | + | - | - | - | - | - | Detail |
| C2H2g25954 | 2:24,286,941-24,288,260 | - | C1H2g22254 | CX2g019582 | LOC_Os02g43250 | Os02g0647300 | - | Detail |
| C2H2g12985 | 2:24,301,822-24,307,280 | + | C1H2g05654 | CX2g024426 | LOC_Os02g43280 | Os02g0647900 | - | Detail |
| C2H2g29445 | 2:24,313,328-24,314,531 | - | C1H2g13691 | CX2g021973 | LOC_Os02g43290 | Os02g0648100 | - | Detail |
| C2H2g03827 | 2:24,330,368-24,333,423 | - | C1H2g15207 | CX2g020713 | LOC_Os02g43300 | Os02g0648300 | - | Detail |
| C2H2g24370 | 2:24,363,625-24,364,119 | - | - | - | - | - | - | Detail |
| C2H2g11895 | 2:24,372,313-24,373,186 | + | C1H2g25916 | CX2g019169 | LOC_Os02g43330 | Os02g0649300 | HOX24, Oshox24, OsHox24, OsSLI1 | Detail |
| C2H2g11536 | 2:24,376,090-24,380,365 | - | C1H2g29202 | CX2g021953 | LOC_Os02g43340 | Os02g0649400 | - | Detail |
| C2H2g22971 | 2:24,381,650-24,382,018 | + | - | CX2g020014 | - | - | - | Detail |
| C2H2g04607 | 2:24,383,987-24,390,208 | + | C1H2g22654 | CX2g021451 | LOC_Os02g43350 | Os02g0649700 | - | Detail |
| C2H2g04813 | 2:24,391,339-24,392,027 | - | C1H2g29127 | CX2g024526 | LOC_Os02g43360 | Os02g0649800 | - | Detail |
| C2H2g23002 | 2:24,396,962-24,400,823 | - | C1H2g17207 | CX2g022915 | LOC_Os02g43370 | Os02g0649900 | YSL2, OsYSL2, Os-YSL2, OsYs6 | Detail |
| C2H2g12264 | 2:24,406,147-24,409,852 | - | C1H2g09379 | CX2g019779 | LOC_Os02g43410 | Os02g0650300 | - | Detail |
| C2H2g21909 | 2:24,420,946-24,421,182 | + | - | CX2g022293 | LOC_Os02g43420 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055236 | 9:16,304,849-16,305,211 | - | - | C2H8g00208 | LOC_Os09g31462 | Os08g0511600 | - | Detail |
| CX9g056061 | 9:16,306,132-16,307,730 | - | C1H9g11917 | C2H9g04680 | LOC_Os09g31466 | Os09g0491692 | - | Detail |
| CX9g056992 | 9:16,308,909-16,311,550 | - | C1H9g09934 | C2H9g19855 | LOC_Os09g31470 | Os09g0491708 | - | Detail |
| CX9g056060 | 9:16,321,847-16,325,141 | - | C1H9g14190 | C2H9g05034 | LOC_Os09g31478 | Os09g0491740 | - | Detail |
| CX9g056126 | 9:16,329,757-16,330,629 | + | C1H9g22948 | - | LOC_Os09g31482 | Os09g0491756 | - | Detail |
| CX9g057938 | 9:16,331,768-16,334,610 | - | C1H9g15367 | C2H9g07920 | LOC_Os09g31486 | Os09g0491772 | - | Detail |
| CX9g057329 | 9:16,367,241-16,367,420 | - | - | - | - | - | - | Detail |
| CX9g056412 | 9:16,383,335-16,387,280 | + | C1H9g09572 | C2H9g11657 | LOC_Os09g31970 | Os09g0492700 | - | Detail |
| CX9g055051 | 9:16,389,459-16,389,817 | + | - | - | - | - | - | Detail |
| CX9g056484 | 9:16,393,688-16,394,390 | - | C1H9g31554 | - | - | - | - | Detail |
| CX9g057184 | 9:16,395,205-16,397,392 | - | C1H9g23417 | C2H9g00529 | LOC_Os09g31980 | Os09g0492800 | - | Detail |
| CX9g055227 | 9:16,399,334-16,399,678 | - | - | - | LOC_Os05g50070 | - | - | Detail |
| CX9g055195 | 9:16,403,535-16,404,086 | + | C1H9g03738 | - | LOC_Os09g31990 | Os09g0492900 | - | Detail |
| CX9g056117 | 9:16,408,973-16,409,578 | + | C1H9g27035 | - | LOC_Os09g32000 | Os09g0493000 | - | Detail |
| CX9g057135 | 9:16,418,804-16,422,444 | + | C1H9g08449 | C2H9g18836 | LOC_Os09g32010 | Os09g0493400 | - | Detail |
| CX9g056463 | 9:16,424,825-16,427,866 | - | C1H9g12558 | C2H9g29348 | LOC_Os09g32020 | Os09g0493500 | OsTKPR1, OsDFR2 | Detail |
| CX9g056369 | 9:16,428,090-16,428,986 | - | - | - | LOC_Os09g32025 | - | - | Detail |
| CX9g056112 | 9:16,429,603-16,430,996 | - | C1H9g18719 | C2H9g29332 | LOC_Os09g32030 | Os09g0493600 | - | Detail |
| CX9g055946 | 9:16,432,134-16,434,764 | - | C1H9g30023 | C2H9g27466 | LOC_Os09g32040 | Os09g0493700 | OsNAC42, NAC42 | Detail |
| CX9g054906 | 9:16,436,269-16,439,637 | - | C1H9g30023 | C2H9g21828 | LOC_Os09g32050 | Os09g0493800 | - | Detail |