| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09631 | 9:8,006,927-8,008,614 | + | C1H9g27205 | CX9g057160 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| C2H9g08878 | 9:8,010,192-8,011,081 | - | C1H9g31109 | CX9g055621 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| C2H9g24688 | 9:8,014,892-8,016,244 | - | C1H9g09285 | CX9g055228 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| C2H9g12132 | 9:8,016,328-8,018,221 | - | - | - | - | - | - | Detail |
| C2H9g24003 | 9:8,020,742-8,023,525 | - | C1H9g17537 | - | LOC_Os09g15760 | Os09g0326850 | - | Detail |
| C2H9g25380 | 9:8,024,096-8,032,549 | - | C1H9g24231 | CX9g055311 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| C2H9g13951 | 9:8,049,916-8,053,048 | + | C1H9g01463 | CX9g055191 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| C2H9g17262 | 9:8,056,980-8,059,451 | + | - | CX9g056621 | - | - | - | Detail |
| C2H9g15972 | 9:8,059,488-8,059,682 | - | - | - | LOC_Os09g15680 | Os09g0325800 | - | Detail |
| C2H9g24883 | 9:8,062,332-8,063,402 | - | C1H9g06365 | CX9g056384 | LOC_Os09g15670 | Os09g0325700 | PP2C1, OsPP2C1, OsSIPP2C1, OsPP2C68, PP2C68, OsPP108 | Detail |
| C2H9g29577 | 9:8,063,432-8,063,764 | + | - | - | - | - | - | Detail |
| C2H9g09634 | 9:8,077,352-8,078,828 | + | C1H9g31373 | CX9g057751 | - | - | - | Detail |
| C2H9g19536 | 9:8,083,013-8,085,577 | + | C1H9g12543 | CX9g057751 | LOC_Os09g14660 | Os09g0325000 | - | Detail |
| C2H9g17279 | 9:8,088,916-8,089,320 | - | - | - | - | - | - | Detail |
| C2H9g14451 | 9:8,095,275-8,096,567 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15560 | Os09g0324400 | - | Detail |
| C2H9g15142 | 9:8,099,495-8,100,904 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15550 | Os09g0324300 | - | Detail |
| C2H9g08875 | 9:8,101,999-8,103,324 | - | C1H9g22857 | CX9g056577 | LOC_Os09g15540 | Os09g0324200 | - | Detail |
| C2H9g12849 | 9:8,105,486-8,105,962 | - | - | CX9g057572 | LOC_Os09g15520 | Os09g0324000 | - | Detail |
| C2H9g30451 | 9:8,113,176-8,114,257 | + | C1H9g26563 | CX9g055980 | LOC_Os09g15510 | Os09g0323700 | - | Detail |
| C2H9g24164 | 9:8,120,999-8,122,070 | - | C1H9g26563 | CX9g057171 | LOC_Os09g15500 | Os09g0323700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055236 | 9:16,304,849-16,305,211 | - | - | C2H8g00208 | LOC_Os09g31462 | Os08g0511600 | - | Detail |
| CX9g056061 | 9:16,306,132-16,307,730 | - | C1H9g11917 | C2H9g04680 | LOC_Os09g31466 | Os09g0491692 | - | Detail |
| CX9g056992 | 9:16,308,909-16,311,550 | - | C1H9g09934 | C2H9g19855 | LOC_Os09g31470 | Os09g0491708 | - | Detail |
| CX9g056060 | 9:16,321,847-16,325,141 | - | C1H9g14190 | C2H9g05034 | LOC_Os09g31478 | Os09g0491740 | - | Detail |
| CX9g056126 | 9:16,329,757-16,330,629 | + | C1H9g22948 | - | LOC_Os09g31482 | Os09g0491756 | - | Detail |
| CX9g057938 | 9:16,331,768-16,334,610 | - | C1H9g15367 | C2H9g07920 | LOC_Os09g31486 | Os09g0491772 | - | Detail |
| CX9g057329 | 9:16,367,241-16,367,420 | - | - | - | - | - | - | Detail |
| CX9g056412 | 9:16,383,335-16,387,280 | + | C1H9g09572 | C2H9g11657 | LOC_Os09g31970 | Os09g0492700 | - | Detail |
| CX9g055051 | 9:16,389,459-16,389,817 | + | - | - | - | - | - | Detail |
| CX9g056484 | 9:16,393,688-16,394,390 | - | C1H9g31554 | - | - | - | - | Detail |
| CX9g057184 | 9:16,395,205-16,397,392 | - | C1H9g23417 | C2H9g00529 | LOC_Os09g31980 | Os09g0492800 | - | Detail |
| CX9g055227 | 9:16,399,334-16,399,678 | - | - | - | LOC_Os05g50070 | - | - | Detail |
| CX9g055195 | 9:16,403,535-16,404,086 | + | C1H9g03738 | - | LOC_Os09g31990 | Os09g0492900 | - | Detail |
| CX9g056117 | 9:16,408,973-16,409,578 | + | C1H9g27035 | - | LOC_Os09g32000 | Os09g0493000 | - | Detail |
| CX9g057135 | 9:16,418,804-16,422,444 | + | C1H9g08449 | C2H9g18836 | LOC_Os09g32010 | Os09g0493400 | - | Detail |
| CX9g056463 | 9:16,424,825-16,427,866 | - | C1H9g12558 | C2H9g29348 | LOC_Os09g32020 | Os09g0493500 | OsTKPR1, OsDFR2 | Detail |
| CX9g056369 | 9:16,428,090-16,428,986 | - | - | - | LOC_Os09g32025 | - | - | Detail |
| CX9g056112 | 9:16,429,603-16,430,996 | - | C1H9g18719 | C2H9g29332 | LOC_Os09g32030 | Os09g0493600 | - | Detail |
| CX9g055946 | 9:16,432,134-16,434,764 | - | C1H9g30023 | C2H9g27466 | LOC_Os09g32040 | Os09g0493700 | OsNAC42, NAC42 | Detail |
| CX9g054906 | 9:16,436,269-16,439,637 | - | C1H9g30023 | C2H9g21828 | LOC_Os09g32050 | Os09g0493800 | - | Detail |