| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g07210 | 1:36,701,248-36,706,802 | + | C2H1g00426 | CX1g000756 | LOC_Os01g71200 | Os01g0938200 | - | Detail |
| C1H1g13834 | 1:36,709,163-36,710,152 | - | - | CX1g000266 | LOC_Os01g71210 | Os01g0938400 | - | Detail |
| C1H1g26126 | 1:36,712,091-36,717,052 | - | C2H1g14108 | CX1g004308 | LOC_Os01g71220 | Os01g0938600 | - | Detail |
| C1H1g10097 | 1:36,721,952-36,724,804 | + | C2H1g29372 | CX1g004180 | LOC_Os01g71230 | Os01g0938900 | - | Detail |
| C1H1g13399 | 1:36,728,801-36,729,172 | + | C2H1g06212 | CX1g005905 | - | Os01g0939000 | - | Detail |
| C1H1g17991 | 1:36,730,047-36,736,200 | + | C2H1g03097 | CX1g004665 | LOC_Os01g71240 | Os01g0939100 | - | Detail |
| C1H1g18399 | 1:36,736,922-36,738,715 | - | C2H1g07622 | CX1g005484 | LOC_Os01g71250 | Os01g0939200 | - | Detail |
| C1H1g15855 | 1:36,739,998-36,743,046 | - | C2H1g16653 | CX1g002440 | LOC_Os01g71256 | Os01g0939300 | - | Detail |
| C1H1g14395 | 1:36,745,046-36,748,212 | - | C2H1g17831 | CX1g005035 | LOC_Os01g71262 | Os01g0939400 | - | Detail |
| C1H1g17803 | 1:36,750,934-36,752,148 | + | C2H7g09412 | CX1g001018 | LOC_Os01g71270 | Os01g0939500 | - | Detail |
| C1H1g19591 | 1:36,754,537-36,758,865 | + | C2H1g21755 | CX1g007004 | LOC_Os01g71280 | Os01g0939600 | - | Detail |
| C1H1g21264 | 1:36,760,002-36,773,868 | + | C2H1g29286 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g12592 | 1:36,774,143-36,779,177 | + | C2H1g28290 | - | LOC_Os01g71300 | Os01g0939700 | - | Detail |
| C1H1g26080 | 1:36,811,858-36,814,634 | + | C2H1g22141 | CX1g000893 | LOC_Os01g71310 | Os01g0940000 | CKX4, OsCKX4, ckx4, OsSCRM, OsSCRM2, SCRM, SCRM2 | Detail |
| C1H1g08967 | 1:36,817,457-36,823,509 | - | C2H1g01876 | CX1g004002 | LOC_Os01g71320 | Os01g0940100 | - | Detail |
| C1H1g04585 | 1:36,844,904-36,845,442 | + | C2H1g06863 | CX1g006883 | LOC_Os01g71330 | Os01g0940600 | - | Detail |
| C1H1g16091 | 1:36,848,582-36,850,305 | + | C2H1g01858 | CX1g000254 | LOC_Os01g71340 | Os01g0940700 | - | Detail |
| C1H1g10602 | 1:36,851,597-36,852,899 | + | C2H1g03308 | CX1g000254 | LOC_Os01g71350 | Os01g0940800 | Gns6 | Detail |
| C1H1g11005 | 1:36,857,741-36,858,706 | + | C2H1g25094 | CX1g000254 | LOC_Os01g71860 | Os01g0947000 | - | Detail |
| C1H1g17272 | 1:36,866,819-36,867,937 | + | C2H1g16744 | CX1g000254 | LOC_Os01g71410 | Os01g0941500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g055236 | 9:16,304,849-16,305,211 | - | - | C2H8g00208 | LOC_Os09g31462 | Os08g0511600 | - | Detail |
| CX9g056061 | 9:16,306,132-16,307,730 | - | C1H9g11917 | C2H9g04680 | LOC_Os09g31466 | Os09g0491692 | - | Detail |
| CX9g056992 | 9:16,308,909-16,311,550 | - | C1H9g09934 | C2H9g19855 | LOC_Os09g31470 | Os09g0491708 | - | Detail |
| CX9g056060 | 9:16,321,847-16,325,141 | - | C1H9g14190 | C2H9g05034 | LOC_Os09g31478 | Os09g0491740 | - | Detail |
| CX9g056126 | 9:16,329,757-16,330,629 | + | C1H9g22948 | - | LOC_Os09g31482 | Os09g0491756 | - | Detail |
| CX9g057938 | 9:16,331,768-16,334,610 | - | C1H9g15367 | C2H9g07920 | LOC_Os09g31486 | Os09g0491772 | - | Detail |
| CX9g057329 | 9:16,367,241-16,367,420 | - | - | - | - | - | - | Detail |
| CX9g056412 | 9:16,383,335-16,387,280 | + | C1H9g09572 | C2H9g11657 | LOC_Os09g31970 | Os09g0492700 | - | Detail |
| CX9g055051 | 9:16,389,459-16,389,817 | + | - | - | - | - | - | Detail |
| CX9g056484 | 9:16,393,688-16,394,390 | - | C1H9g31554 | - | - | - | - | Detail |
| CX9g057184 | 9:16,395,205-16,397,392 | - | C1H9g23417 | C2H9g00529 | LOC_Os09g31980 | Os09g0492800 | - | Detail |
| CX9g055227 | 9:16,399,334-16,399,678 | - | - | - | LOC_Os05g50070 | - | - | Detail |
| CX9g055195 | 9:16,403,535-16,404,086 | + | C1H9g03738 | - | LOC_Os09g31990 | Os09g0492900 | - | Detail |
| CX9g056117 | 9:16,408,973-16,409,578 | + | C1H9g27035 | - | LOC_Os09g32000 | Os09g0493000 | - | Detail |
| CX9g057135 | 9:16,418,804-16,422,444 | + | C1H9g08449 | C2H9g18836 | LOC_Os09g32010 | Os09g0493400 | - | Detail |
| CX9g056463 | 9:16,424,825-16,427,866 | - | C1H9g12558 | C2H9g29348 | LOC_Os09g32020 | Os09g0493500 | OsTKPR1, OsDFR2 | Detail |
| CX9g056369 | 9:16,428,090-16,428,986 | - | - | - | LOC_Os09g32025 | - | - | Detail |
| CX9g056112 | 9:16,429,603-16,430,996 | - | C1H9g18719 | C2H9g29332 | LOC_Os09g32030 | Os09g0493600 | - | Detail |
| CX9g055946 | 9:16,432,134-16,434,764 | - | C1H9g30023 | C2H9g27466 | LOC_Os09g32040 | Os09g0493700 | OsNAC42, NAC42 | Detail |
| CX9g054906 | 9:16,436,269-16,439,637 | - | C1H9g30023 | C2H9g21828 | LOC_Os09g32050 | Os09g0493800 | - | Detail |