| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03150 | 1:32,023,811-32,028,243 | - | C1H1g05990 | CX1g006004 | LOC_Os01g62510 | Os01g0750100 | WRKY13, OsWRKY13 | Detail |
| C2H1g15515 | 1:32,041,546-32,042,130 | - | C1H1g19031 | CX1g006003 | LOC_Os01g62530 | - | - | Detail |
| C2H1g08528 | 1:32,052,668-32,053,780 | - | C1H1g19031 | CX1g006003 | LOC_Os01g62560 | - | - | Detail |
| C2H1g16142 | 1:32,055,376-32,061,997 | + | C1H1g16879 | CX1g005275 | LOC_Os01g62570 | Os01g0843300 | - | Detail |
| C2H1g29809 | 1:32,068,801-32,069,783 | + | C1H1g11813 | CX1g005906 | LOC_Os01g62600 | Os01g0843800 | - | Detail |
| C2H1g10545 | 1:32,070,185-32,071,425 | + | C1H1g11813 | CX1g005906 | LOC_Os01g62600 | Os01g0842500 | - | Detail |
| C2H1g06815 | 1:32,083,725-32,084,809 | + | C1H1g04507 | CX1g003486 | LOC_Os01g62610 | Os01g0844300 | OsFKBP20-1b | Detail |
| C2H1g25771 | 1:32,085,534-32,089,912 | - | C1H1g01125 | CX1g003345 | LOC_Os01g62620 | Os01g0844400 | - | Detail |
| C2H1g22722 | 1:32,105,359-32,105,887 | + | C1H1g20147 | - | - | - | - | Detail |
| C2H1g26004 | 1:32,115,263-32,122,680 | + | C1H1g08181 | CX1g005061 | LOC_Os01g62650 | Os01g0844800 | - | Detail |
| C2H1g26466 | 1:32,148,007-32,150,019 | + | C1H1g19830 | CX1g004761 | LOC_Os01g62760 | Os01g0846300 | - | Detail |
| C2H1g02239 | 1:32,151,032-32,151,428 | + | C1H1g10954 | CX1g001759 | LOC_Os01g62770 | Os01g0846400 | - | Detail |
| C2H1g17015 | 1:32,158,441-32,170,631 | + | C1H1g22173 | CX1g003923 | LOC_Os01g62790 | Os01g0846500 | - | Detail |
| C2H1g07497 | 1:32,172,952-32,178,958 | - | C1H1g30030 | CX1g002085 | LOC_Os01g62800 | Os01g0846600 | - | Detail |
| C2H1g09826 | 1:32,180,092-32,188,818 | - | C1H1g20533 | - | - | - | - | Detail |
| C2H1g05456 | 1:32,192,702-32,197,731 | + | C1H1g13164 | CX1g004720 | LOC_Os01g62810 | Os01g0846800 | - | Detail |
| C2H1g21397 | 1:32,198,439-32,203,209 | - | C1H1g18933 | CX1g004243 | LOC_Os01g62820 | Os01g0846900 | - | Detail |
| C2H1g26544 | 1:32,206,772-32,207,209 | - | - | CX1g004162 | - | - | - | Detail |
| C2H1g03584 | 1:32,208,762-32,211,224 | + | C1H1g23016 | CX1g005615 | LOC_Os01g62840 | Os01g0847200 | - | Detail |
| C2H1g03289 | 1:32,212,302-32,216,802 | - | C1H1g02630 | CX1g001706 | LOC_Os01g62850 | Os01g0847300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |