| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g20861 | 9:5,764,607-5,767,324 | - | C1H9g19420 | CX9g054971 | LOC_Os09g11440 | Os09g0286300 | - | Detail |
| C2H9g08679 | 9:5,768,796-5,778,211 | - | C1H9g09221 | CX9g057306 | LOC_Os09g11450 | Os09g0286400 | OsNHX5, GPA6 | Detail |
| C2H9g16456 | 9:5,778,533-5,779,065 | - | C1H9g28241 | - | - | Os09g0286501 | - | Detail |
| C2H9g10409 | 9:5,784,767-5,785,447 | - | C1H9g07448 | CX9g057392 | LOC_Os09g11460 | Os09g0286600 | - | Detail |
| C2H9g16518 | 9:5,807,638-5,814,361 | - | C1H9g15004 | CX9g055054 | LOC_Os09g11480 | Os09g0287000 | - | Detail |
| C2H9g27982 | 9:5,848,064-5,848,879 | - | C1H9g21283 | CX9g057241 | LOC_Os09g11480 | Os09g0287000 | - | Detail |
| C2H9g23717 | 9:5,880,021-5,883,546 | - | C1H9g23365 | CX9g056284 | LOC_Os09g11510 | Os09g0287300 | - | Detail |
| C2H9g22223 | 9:5,884,674-5,886,631 | - | C1H9g29832 | CX9g057407 | LOC_Os09g11520 | Os09g0287500 | - | Detail |
| C2H9g07373 | 9:5,927,265-5,927,528 | + | C1H9g15744 | - | - | - | - | Detail |
| C2H9g20429 | 9:5,929,829-5,931,463 | + | C1H9g15744 | CX9g057052 | - | - | - | Detail |
| C2H9g19798 | 9:5,977,911-5,978,633 | + | - | CX9g056526 | - | - | - | Detail |
| C2H9g06232 | 9:6,008,923-6,009,518 | - | - | - | - | - | - | Detail |
| C2H9g30434 | 9:6,011,815-6,014,435 | - | C1H9g03429 | CX9g055733 | LOC_Os12g29630 | - | - | Detail |
| C2H9g15538 | 9:6,065,488-6,066,987 | - | C1H9g11310 | CX9g055383 | LOC_Os04g02280 | Os04g0113000 | - | Detail |
| C2H9g28899 | 9:6,067,139-6,069,447 | + | C1H9g20260 | CX9g057747 | LOC_Os09g12240 | Os09g0123300 | - | Detail |
| C2H9g00125 | 9:6,175,070-6,175,583 | + | - | - | - | - | - | Detail |
| C2H9g13431 | 9:6,260,041-6,261,216 | + | C1H9g24844 | CX9g057538 | LOC_Os09g12150 | Os09g0292900 | IBF1 | Detail |
| C2H9g05581 | 9:6,368,967-6,370,495 | + | C1H9g05988 | CX9g055517 | LOC_Os09g12230 | Os09g0293400 | OsUBC18 | Detail |
| C2H9g02868 | 9:6,375,109-6,378,753 | - | C1H9g27936 | CX9g055853 | LOC_Os09g12240 | Os09g0293500 | BRL1, OsBRL1 | Detail |
| C2H9g17153 | 9:6,404,405-6,408,014 | + | C1H9g24677 | CX9g056913 | LOC_Os09g12270 | Os09g0293900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX9g056990 | 9:16,164,439-16,165,585 | - | - | C2H9g19556 | LOC_Os09g30060 | Os09g0477550 | - | Detail |
| CX9g055842 | 9:16,166,667-16,169,438 | + | C1H9g01267 | C2H9g06481 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| CX9g055017 | 9:16,175,487-16,177,574 | + | C1H9g06099 | C2H9g27532 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| CX9g056525 | 9:16,178,791-16,179,027 | + | - | - | - | - | - | Detail |
| CX9g057192 | 9:16,180,931-16,181,101 | - | - | - | - | - | - | Detail |
| CX9g056925 | 9:16,186,023-16,186,520 | - | C1H9g24450 | - | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| CX9g057197 | 9:16,200,893-16,203,035 | + | C1H9g04944 | C2H9g14003 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| CX9g057575 | 9:16,205,695-16,208,775 | + | C1H9g09129 | C2H9g15092 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| CX9g057858 | 9:16,209,184-16,211,624 | - | C1H9g25625 | C2H9g21244 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| CX9g056203 | 9:16,225,325-16,231,445 | - | C1H9g18585 | C2H9g19815 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| CX9g056477 | 9:16,240,894-16,242,729 | - | - | C2H8g22017 | LOC_Os09g31400 | Os09g0490200 | - | Detail |
| CX9g055344 | 9:16,247,194-16,251,097 | - | C1H9g02585 | C2H9g23216 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| CX9g055632 | 9:16,258,053-16,260,818 | - | C1H9g14314 | C2H9g07102 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| CX9g057163 | 9:16,267,092-16,270,272 | - | C1H9g17403 | C2H9g00506 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| CX9g055753 | 9:16,272,980-16,273,147 | + | - | - | - | - | - | Detail |
| CX9g057353 | 9:16,287,702-16,288,285 | - | C1H9g05651 | - | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| CX9g055939 | 9:16,293,285-16,294,307 | - | C1H9g05729 | C2H9g22625 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| CX9g056573 | 9:16,296,581-16,296,952 | - | C1H9g23839 | - | - | - | - | Detail |
| CX9g057982 | 9:16,298,155-16,301,069 | - | C1H9g24105 | C2H9g01096 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| CX9g054919 | 9:16,302,298-16,303,401 | - | C1H9g12273 | C2H9g07868 | LOC_Os09g31458 | Os09g0491676 | - | Detail |